Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g03496 ATGCTAGGGAAAAAGATGGTATGCTTAAAGAAACTGGCGAAAAAGGTGAAGGTTGTAAGTGGAGTTGACCCTGACCCTGGTCAATATGAGTATTTGCTTGAGGAATATGAAGAAGAACACCCCACCAAAACACCCCAAACTGGCTTTTTTGCACTTTATGTTGGGGAGGAGCGTCAAAGATACACGGTTCCAATCCACTACCTTTCTCACCCCTTGTTCAAGATGCTGTTGGAGAAGGCATACAATGAATTTGGGTTTGATCAGAGCAGTGGCTTGGTAGTTCCATGCAGTGTCTCCACATTTCAAGAGGTGGTGAATGCTATAGAAAGCAACAATGGCAAGTTTGACTTGGGAAATTTTTTTGAGGAAGTTGTTTGA 378 0.4286 MLGKKMVCLKKLAKKVKVVSGVDPDPGQYEYLLEEYEEEHPTKTPQTGFFALYVGEERQRYTVPIHYLSHPLFKMLLEKAYNEFGFDQSSGLVVPCSVSTFQEVVNAIESNNGKFDLGNFFEEVV* 126
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g03496 125 Pfam Auxin responsive protein 36 107 IPR003676 GO:0009733
Rops8g03496 125 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 34 104 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g03496 Rops-Chr8 74405062 74405439 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g03496 39 111 Calmodulin-binding Proteins AT5G20810 52.055 3.08e-20 79.7