Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g03493 ATGATCATCAGCCAAACACACGGGAACCCGCGCTCCTTGTTTTTGTTTCGTGTGCTTCTGAATAGCCGCTTCGTTTCTCAGCAATTCGCTTCTGAATTGAATCAGAATATGGATACATCAAATCCTGCGGTCTTTGTCAATGCAGAATTATTGCACTTTTATGTTGGAAGAAGGGTCCGGGCAGTGATGCAGGTTGTGAGATCTGATGGTGTAGCTGTCATTGGAAAATCAGTGGATGAGAAGCAGCTGCTTGTAAAAGGGTCACCGCCACCTGCTCCTCTTACAAAATTTGTAGAAGTTATTGGTATTGTTGACAATGATAAGTCCATCCGTGCTGAGATATGGACCAATTTTGGTGATGCAATTGATACTGTCAGCTACAATAAGCTTTGTCAGCTTGCAAATGGAGAATTTAAACACTTGTTCCTTTGA 432 0.4236 MIISQTHGNPRSLFLFRVLLNSRFVSQQFASELNQNMDTSNPAVFVNAELLHFYVGRRVRAVMQVVRSDGVAVIGKSVDEKQLLVKGSPPPAPLTKFVEVIGIVDNDKSIRAEIWTNFGDAIDTVSYNKLCQLANGEFKHLFL* 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g03493 143 CDD RPA3 42 135 - -
Rops8g03493 143 Gene3D - 37 143 IPR012340 -
Rops8g03493 143 PANTHER REPLICATION PROTEIN A 14 KDA SUBUNIT A-RELATED 33 143 - -
Rops8g03493 143 Pfam Replication factor A protein 3 37 139 IPR013970 GO:0003677|GO:0005634|GO:0006260|GO:0006281|GO:0006310
Rops8g03493 143 SUPERFAMILY Nucleic acid-binding proteins 42 142 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g03493 Rops-Chr8 74370206 74375061 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g03493 37 143 Core DNA Replication Machinery Family AT4G18590 63.551 2.24e-49 152
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g03493 K10740 - gmx:100306641 177.563
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops8g03493 8 74370206 74375061 Rops8g03493 8 74370206 74375061 ECH
Rops8g03493 8 74370206 74375061 Rops6g01365 6 29159058 29167140 PCT