Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g03485 ATGCAAAACAGTGAGGAACAAAAGTTTATAGTCCGGAAACTAGAGATCACAGACAAGGGGAAAGGTTTCATAGAGCTACTGCAACAGCTTAGTGTTTGTGATTCTGTCTCTGACAAGGAATTTGAGGATCGATTTCAAGAGCTCAGTTCCCTTGGAGATGACCATGTTATCTGCGTTATTGAAGATGAGCTCTCTGGAAAGATCATTGCAACAGGGAGTGTGTTTATTGAGAAGAAATTCCTAAGAAATTGTGGCAAAGTTGGGCATATTGAGGATGTTGTTGTGGATTCCAGCATTCGTGGGAAACAATTGGGAAAGAAAATAGTCAACTTCCTCACAGATCATGCTCGTTCAATGGGGTGCTATAAGGTAATTCTTGATTGCAGCGTTGAGAACAAGGCTTTCTACGAGAAATGTGGCTTCCAGCAGAAATCAGTTCAGATGGCTATATATTTTACTTGA 462 0.4069 MQNSEEQKFIVRKLEITDKGKGFIELLQQLSVCDSVSDKEFEDRFQELSSLGDDHVICVIEDELSGKIIATGSVFIEKKFLRNCGKVGHIEDVVVDSSIRGKQLGKKIVNFLTDHARSMGCYKVILDCSVENKAFYEKCGFQQKSVQMAIYFT* 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g03485 153 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 9 152 IPR016181 -
Rops8g03485 153 Gene3D - 6 153 - -
Rops8g03485 153 FunFam Glucosamine 6-phosphate N-acetyltransferase 1 149 - -
Rops8g03485 153 CDD NAT_SF 59 127 - -
Rops8g03485 153 PANTHER GLUCOSAMINE 6-PHOSPHATE N-ACETYLTRANSFERASE 3 148 IPR039143 GO:0004343|GO:0006048
Rops8g03485 153 Pfam Acetyltransferase (GNAT) family 38 141 IPR000182 GO:0016747
Rops8g03485 153 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 9 153 IPR000182 GO:0016747
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Rops8g03485 Acetyltransf_1 8.8e-18 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g03485 K00621 - gmx:100499668 273.092