Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g03479 ATGGTGGTGAGAGAAGGTGAGATAAAGTCCCAAGGGGAAGTGGAGAGGGAAGAAGAAGAAGTGAACAAGAATCATCATCATCCATTATCATCATCACTTGGAAGACAATCATCAATATACTCTCTCACCCTTGACGAGTTCCAGCACAGCCTATGTGATAGTAGTGGCAAAAATTTCGGGTCCATGAACATGGACGAGTTCTTAAGCAGTATCTGGAACGCAGAAGAGAACCAAGCCATTAACAACTCTTCTTCCAACAACCCTTTGAACATAACACACAACCACAAAGGGATCATCACAAAGCAACCAAGCCTCCCTCGCCAATCTTCACTATCCATTCCTGCACCTCTTTGCAGGAAAACAGTGGATGAAGTTTGGTCTGAGATACACAGAGAACAACAACGACAGCAGCAAAACAACAACAACAATAACAACAATGTTGTTCAGAATACCGGTTCTGCCCCTCGCCAACCCACTTTTGGGGAGATGACTTTAGAAGATTTCTTGGTTAATGCAGGGGTAGTTCGGGAACCAATTGCACCAGTTTCTCACCAGCAACAACAACAGCATTATGGAGTGTATCCAAATAACAACACTAGCATGGCTCCTTCTTATGTTATTGGTGGTGGTGGTTACCAAGCGATGGCTCAGGGAGGTGGTGGAGTTGGGGAGACTTCTGGCTATGCTGGGAATGGTAAGAGGGATGGTGGTGGTGGTTATCCTCCGCCGCCGCCAGCAGGGGTTTGCTTTGGAGGGGGTGGCTATGGGGTGGCACCCACTATGGGAATGGGTGTGCCGGTGAGCCCGGCTTCATCTGATGGGTTAGGCAATGACAACTGTGGTGGTCAATTTGGACGAAGGAAGAGGATGGGTGATGGTCCTGTGGAAAAGGTGGTGGAAAGAAGGCAGAGGAGGATGATCAAGAATAGAGAATCAGCCGCAAGATCTAGAGCTAGAAAACAGGCATACACAGTTGAATTAGAAGCAGAACTGAACCAATTAAGAGAAGAGAACGCCCAACTGAAACAGGAACTGGCCGAGCTCGAGAGGAGAAGGAGGCAACAGTGTTTAGAGGAAGTGAACGTGAGAGGTCAAACCAAAGCTCAGAAGGCAAAAGAGAAACTGAGAGCATTGAGGAGGAACCTGAGTTGCACCCTGTGA 1161 0.4772 MVVREGEIKSQGEVEREEEEVNKNHHHPLSSSLGRQSSIYSLTLDEFQHSLCDSSGKNFGSMNMDEFLSSIWNAEENQAINNSSSNNPLNITHNHKGIITKQPSLPRQSSLSIPAPLCRKTVDEVWSEIHREQQRQQQNNNNNNNNVVQNTGSAPRQPTFGEMTLEDFLVNAGVVREPIAPVSHQQQQQHYGVYPNNNTSMAPSYVIGGGGYQAMAQGGGGVGETSGYAGNGKRDGGGGYPPPPPAGVCFGGGGYGVAPTMGMGVPVSPASSDGLGNDNCGGQFGRRKRMGDGPVEKVVERRQRRMIKNRESAARSRARKQAYTVELEAELNQLREENAQLKQELAELERRRRQQCLEEVNVRGQTKAQKAKEKLRALRRNLSCTL* 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g03479 386 FunFam protein ABSCISIC ACID-INSENSITIVE 5 isoform X1 299 355 - -
Rops8g03479 386 CDD bZIP_plant_BZIP46 301 355 - -
Rops8g03479 386 Pfam bZIP transcription factor 301 351 IPR004827 GO:0003700|GO:0006355
Rops8g03479 386 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 34 369 IPR043452 GO:0003700|GO:0045893
Rops8g03479 386 MobiDBLite consensus disorder prediction 1 34 - -
Rops8g03479 386 Coils Coil 317 358 - -
Rops8g03479 386 SUPERFAMILY Leucine zipper domain 301 351 IPR046347 GO:0003700|GO:0006355
Rops8g03479 386 MobiDBLite consensus disorder prediction 1 26 - -
Rops8g03479 386 Coils Coil 361 381 - -
Rops8g03479 386 MobiDBLite consensus disorder prediction 132 158 - -
Rops8g03479 386 SMART brlzneu 297 362 IPR004827 GO:0003700|GO:0006355
Rops8g03479 386 MobiDBLite consensus disorder prediction 132 159 - -
Rops8g03479 386 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 299 351 IPR004827 GO:0003700|GO:0006355
Rops8g03479 386 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 304 319 IPR004827 GO:0003700|GO:0006355
Rops8g03479 386 Gene3D - 299 356 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g03479 Rops-Chr8 74213888 74216921 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g03479 1 356 bZIP Transcription Factor Family AT2G36270 52.083 1.75e-107 321
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Rops8g03479 bZIP_1 2.1e-12 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g03479 K14432 - gmx:100818567 401.364
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops8g03479 8 74213888 74216921 Rops8g03479 8 74213888 74216921 ECH
Rops8g03479 8 74213888 74216921 Rops6g00877 6 21782594 21788512 PCT