Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g03472 ATGATTAATGCCGATTTGTCTCGTTTCGCCGTTTCTTCCTCTTTCTCTCTCATAACCTTTCCGACTCTGTTATCTTTCCCCGTTAAGATTCCTTCTCTTCCCATTCCCCTATTCCCTTTCTTATCTCCTCCTTTCTCCAATTCCCTCAACCATTCCTTTTCAATCAGATCCGGTACCAGATATGGCGGAAGAGCATGGATGCCAAGCACCGGAAGAGACATCTGTTTGAAGGAACAAGAACAAGCCAAAACCAAATCCACCATCGAAACCGCTCTTTCGTCCTCCACCACCGCCGCCGCGGCGGAGGCGGAACCAGCATCTTCGCTTCCGCTGGCCGTCAAATCTCTCCCTCAACCACCGGCGTTGACTTCACCAACTGTCGTGCCTGAAGCCTCCGTTCCGGCTCAACCGAACCGGTGCGGCACGTGCAGAAAACGCGTCAGGTTAACCGGTTTCAAGTGCAGATGCGGAACCGTTTTTTGCGGGGCCCACAGGTATCCAGAGAAACACGGTTGCGGCTTTGATTTCAAGGCGGTGGGGAGAGAGGAGATAGCAAGAGCGAATCCCGTGATCAAAGCCGAGAAGCTGGAAAAGATTTAA 600 0.52 MINADLSRFAVSSSFSLITFPTLLSFPVKIPSLPIPLFPFLSPPFSNSLNHSFSIRSGTRYGGRAWMPSTGRDICLKEQEQAKTKSTIETALSSSTTAAAAEAEPASSLPLAVKSLPQPPALTSPTVVPEASVPAQPNRCGTCRKRVRLTGFKCRCGTVFCGAHRYPEKHGCGFDFKAVGREEIARANPVIKAEKLEKI* 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g03472 199 Gene3D - 118 195 IPR035896 -
Rops8g03472 199 PANTHER AN1-TYPE ZINC FINGER PROTEIN 78 199 - -
Rops8g03472 199 SMART AN1_Zf_4 140 177 IPR000058 GO:0008270
Rops8g03472 199 Pfam AN1-like Zinc finger 140 176 IPR000058 GO:0008270
Rops8g03472 199 ProSiteProfiles Zinc finger AN1-type profile. 134 180 IPR000058 GO:0008270
Rops8g03472 199 SUPERFAMILY AN1-like Zinc finger 132 194 IPR035896 -
Rops8g03472 199 FunFam Zinc finger AN1-type containing 6 120 195 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g03472 Rops-Chr8 74077576 74078496 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g03472 116 199 C2H2 Transcription Factor Family AT3G52800 64.706 2.32e-34 118
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g03472 - - gmx:100527251 165.622