Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g03468 ATGATGGACTCACACAAGCAACTCTTTCCCCTTCTCTCTCTTTTCCTAATTCTTCATCTCTCAGGACTAAGGGGGTTGCAAGCACAGACTCCCCTTCAACATCACAACCTTAATGATCACCCAACAAAATTGTTTGTTTTCGGGGACTCATATGCTGACACAGGCAACATCAGGAAAGGGTTGTCTAATTCATGGAAAGACCCTTATGGCACAACCTTTCCCGGCAAGCCCGCCGGCCGATTTTCCGACGGAAGAGTCCTAACCGACTACATTGCTAAATATTTGAAAGTGAAATCGCCAGTGCCATACAGAATGAGGAAGCTGATGCCGCAGCATCTAAAATATGGGATGAACTTTGCATTTGGTGGCACTGGTGTGTTTGACACGTCGGTTCCAGCTCCAAACATGACAACCCAGATCGATTTGTTGCAACAAGTCATCAAAGACAAAGTGTACACCGCCTCAGATCTCAGCAACTCCGTGGTCCTTCTCTCTGTGGCTGGAAATGACTATAGTCATTACTTGGCAACAAATGGCTCTGCTGAGGGTTTACCATCATTCGTGGCCGCGGTGGTTAATCAAACAACCAACAATGTGATTCGCATCAAAAGATTGGGAGTGAAGAAAATTGTTGTGTCTGGCCTACAACCCCTTGGATGTCTTCCTCAGGTCACAGCCTTATCCTCATTCCAGCAATGCAATGCCAGCTCCAACAACCTCGTAGTTCTCCATAACAACCTCTTGAACCAAGCTGTGACCACATTGAACCAACAAACCAAGGATCATTCCCTCCTGATTCTTAACCTTTACGACAGCTTCATGTCGGTGCTGAACCACCCATCCACCCATAACATTCAGAAGAACCAGTTGAAGCCATGTTGTGTTGGGGTGAGCAGTGAGTATCAGTGTGGGAGTGTGGACAACAGTGTGAAGAAATACAGGGTGTGTGATGAGCCCAAATCAGCTTTCTTTTGGGATATGGTGCACCCCACAGAAGCAGGATGGCATGCAGTGTATAACAAGTTGCGAACCATGAATGCTCTTCAACAGATTCATTACTAG 1062 0.4642 MMDSHKQLFPLLSLFLILHLSGLRGLQAQTPLQHHNLNDHPTKLFVFGDSYADTGNIRKGLSNSWKDPYGTTFPGKPAGRFSDGRVLTDYIAKYLKVKSPVPYRMRKLMPQHLKYGMNFAFGGTGVFDTSVPAPNMTTQIDLLQQVIKDKVYTASDLSNSVVLLSVAGNDYSHYLATNGSAEGLPSFVAAVVNQTTNNVIRIKRLGVKKIVVSGLQPLGCLPQVTALSSFQQCNASSNNLVVLHNNLLNQAVTTLNQQTKDHSLLILNLYDSFMSVLNHPSTHNIQKNQLKPCCVGVSSEYQCGSVDNSVKKYRVCDEPKSAFFWDMVHPTEAGWHAVYNKLRTMNALQQIHY* 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g03468 353 Gene3D SGNH hydrolase 33 352 IPR036514 -
Rops8g03468 353 CDD SGNH_plant_lipase_like 44 342 IPR035669 -
Rops8g03468 353 Pfam GDSL-like Lipase/Acylhydrolase 44 341 IPR001087 GO:0016788
Rops8g03468 353 PANTHER OSJNBB0059K02.9 PROTEIN 15 349 - -
Rops8g03468 353 SUPERFAMILY SGNH hydrolase 41 342 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g03468 Rops-Chr8 74042198 74046289 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g03468 38 338 Pollen Coat Proteome AT1G75930 27.301 5.00e-29 113
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g03468 - - gmx:100788092 510.375
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops8g03468 8 74042198 74046289 Rops8g03468 8 74042198 74046289 ECH
Rops8g03468 8 74042198 74046289 Rops6g00888 6 22018526 22021681 PCT