Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g03467 ATGAATATCTTGTGTAACTGTGAAACTTGCCAAGCTTATCTCACTTCAAGCTGGTCCAAAAATTTCGACAATCTTTGTGATTGGTATGCTCATCTTCTAAAAAACTCCCCCACTAAAACCATTCACATACACGTGCTTGGAAACACCATCACTGCAAACCCAGATAACGTTGAGTACATGCTGAAGACAAGATTCGAGAATTACCCGAAAGGCAAAACCTTTTCCACGATCTTGGGTGATTTTCTTGGCCGAGGTATTTTCAACGTGGATGGTGAATTGTGGAGCTTTCAGAAGAAGATGGCAAGTTTAGAACTCAACAAGAAATCCATAACATCCTTTGCCTTCGAGATTGTCAATTTCGAAATCCAACATCGACTTGTCCCTCTTCTATTGACAAAGCAAGATGATGTTTTGGATTTGCAGGATGTTTTTAGAAGATTCTCATTCGATAGTATTTGTAGATTCACTTTCGGATTGGATCCTATGTGTCTAGAACTTTCTTTGCCCATATCGGAGTTTGCTCTTTCCTTTGACTTGGCATCTCAATTGTCAGCAGAGAGAGCCATGACAGTGTCCCCTCTTATTTGGAAGATCAAAAGATTGCTCAATATAGGTAGCGAGAAGAAGCTTCGAGAAGCTGTTAGAATGATCAATATATTAGCCAAAGAGGTCATAAGGCAAAAAAGGAAAATGGGGTTTTCTGAGCACAAAGACCTTTTGTCCCGGTTCATGAGTACTATCAATGATGACACATATTTGAGAGACATTATCGTAAGCTTTTTATTAGCTGGCCGTGACACTGTTACTTCAGCACTCATCAGTTTCTTCTGGCTACTTGCAAAACACCCAGAAATAGAGTCAATGATTCGGAGAGAAGCAGATCAGGTGATTGGAGAAGACAAGGAGGTTACAAGCTTCCAACAGCTACAGCAACTGCACTTTCTACAAGCAGCAATATATGAGAGCATGAGACTGTATCCCCCAATTCAATTTGATTCCAAGTTCTGTTTAGAAGATGATGTGTTACCTGATGGGACATTTGTGAAGAGTGGAACTAGGGTTACTTACCATCCATATGCAATGGGTAGGTTGGAGGAAATATGGGGTCAAGATTGTTTAGATTTCAAGCCTCAAAGGTGGTTGAAGGATGGGATGTTTTGTCCTCAAAATCCATTTAAATACCCAGTTTTTCAAGCAGGGATGAGGGTGTGTTTGGGAAAAGAAATGGCTCTTCTTGAGCTCAAAAGTGTGGCAATTTCATTACTTCGACGGTTCCACATCAAATTGGTGGCACCCCATCATCATCATCGCACCCCACGTTTCTCTCCTGGCCTCACTGCCACTTTTAGTCGTGGCCTTCCCGTTAAGGTACGTGAACGAGGCACAAACCACCCTCACACTCCTCATCATTCATAA 1416 0.416 MNILCNCETCQAYLTSSWSKNFDNLCDWYAHLLKNSPTKTIHIHVLGNTITANPDNVEYMLKTRFENYPKGKTFSTILGDFLGRGIFNVDGELWSFQKKMASLELNKKSITSFAFEIVNFEIQHRLVPLLLTKQDDVLDLQDVFRRFSFDSICRFTFGLDPMCLELSLPISEFALSFDLASQLSAERAMTVSPLIWKIKRLLNIGSEKKLREAVRMINILAKEVIRQKRKMGFSEHKDLLSRFMSTINDDTYLRDIIVSFLLAGRDTVTSALISFFWLLAKHPEIESMIRREADQVIGEDKEVTSFQQLQQLHFLQAAIYESMRLYPPIQFDSKFCLEDDVLPDGTFVKSGTRVTYHPYAMGRLEEIWGQDCLDFKPQRWLKDGMFCPQNPFKYPVFQAGMRVCLGKEMALLELKSVAISLLRRFHIKLVAPHHHHRTPRFSPGLTATFSRGLPVKVRERGTNHPHTPHHS* 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g03467 471 Pfam Cytochrome P450 49 430 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops8g03467 471 SUPERFAMILY Cytochrome P450 23 460 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops8g03467 471 PRINTS P450 superfamily signature 263 280 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops8g03467 471 PRINTS P450 superfamily signature 404 415 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops8g03467 471 PRINTS P450 superfamily signature 395 404 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops8g03467 471 PRINTS P450 superfamily signature 317 328 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops8g03467 471 Gene3D Cytochrome P450 12 464 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops8g03467 471 PRINTS E-class P450 group I signature 394 404 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops8g03467 471 PRINTS E-class P450 group I signature 272 298 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops8g03467 471 PRINTS E-class P450 group I signature 404 427 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops8g03467 471 PRINTS E-class P450 group I signature 316 334 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops8g03467 471 PRINTS E-class P450 group I signature 252 269 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops8g03467 471 PANTHER CYTOCHROME P450 13 453 - -
Rops8g03467 471 CDD CYP86A 43 433 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g03467 Rops-Chr8 74017979 74019394 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g03467 5 460 Cytochrome P450 AT2G27690 60.345 0.0 590
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g03467 K20624 - gmx:102662117 789.26
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops8g03467 8 74017979 74019394 Rops3g01071 3 14321776 14323415 ECH
Rops8g03467 8 74017979 74019394 Rops8g03467 8 74017979 74019394 ECH