Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g03466 ATGCGCAGGAAGGTGATCGGAGCAAAATACTTCAACCTTGACCCAAGTGTTCCCAACATAGATAACCCTAGTCCGGTCGACGATCAGGGCCATGGCACTCACACGGCGTCGACGGCGGCCGGCTCGACAGTGAGGGGTGCAAGTTTCTATGGCGTTGGCAAAGGAACCGCACGTGGTGGTGTCCCATCTGCACGCATAGCCATGTACAAGGTTTGTTGGAGCGTTGGGTGCAGTGACATGGACATGCTTGCTGGCTTCGATGAAGCTATCGCCGACGGTGTCAACTTGATATCAGTGTCCATTGGAGGACCCTCACGTGACTTCTTCTCTGACCCAATGGCCATTGGAGCATTTCACGCCATGAGGAGAGGTATTCTCACTTCTTGCTCCGCTGGAAACGATGGCCCTCAACCTACCACGGTTGAAAACGTTGCTCCTTGGATTTTGACCGTGGCTGCTTCCTCCCTTGATAGACAGTTCACCACACTCATAGTATTGGGTGATGGAAAGAACACTACAGGAATATCTATCAATACCTTTTCACCTAAGAAAAAGATGTACCCATTGACTAGTGGAACCCTTGCTGCGAACCTTAGTGGAGATGGTTTTGGCAATCCTAGTGGTTGTGATTATGGGACTCTAAGCAAGGACAAGGTGAAGGGAAGGATAGTGTACTGTATTGGGGGTACTGGCGGCCAGGATTTGACCCTCAAAGAATTAGGGGGAGCAGGGACCATTGTAGGCCTTGATCAGAAAACAGACGCTTCCTACACCACAGTTATTCCAGGGGCCTTTGTTGAAGCCAATACTGCGGGCAGAACTATTGATCTCTACATCAATTCCACAAAGAATGCTCAAGCAGTTATACACAAGACAACAACTAAACAAATCCCTGCTCCATATCTGGCTTCTTTTTCATCCAGGGGTCCTGAACTTATCACTCGTAGCATCCTCAAGCCTGACTTGGCTGCTCCGGGACTGAACATACTAGCTGCTTATTCCAAACTGGCAACAGTAACAGGGTACCCTGAAGACACTCGTCACGATGTTTTTAATATAATATCAGGAACATCTATGTCCTGTCCACATGCCACTGCTGCTGCTGCCTATGTCAAATCCTTCCACCCTAACTGGAGTCCAGCTGCAATTAAATCTGCCCTCATGACGACTGCCACTCCCTTGAAAATCAGTGACAATTATACGGAGCTGGGATCTGGGTCAGGACAGATTAACCCAGTAAAAGCATTGCAGCCTGGCCTAGTTTATGACATTAGAATGAACTCCTATATTGCTTTTCTATGCAAGCAAGGCTACAACAGCACTAGCATTGGCATACTAATTGGCAGTAAAGGTTTCAATTGCAAAAGCATTAAGCCTGCACGAGGCACTGATGGAATCAACTACCCTACCATGCATGTCCAGCTCCTGAGTCTCAGTTCTAGCATTTCTGCAGTTTTTCATCGGACTGTGACTAATGTAGGACACGAAAATTCAACGTACAAGGCTAAAGTCACAGCACCTGAGGGTCTTTCTGTCGAGGTCATCCCAGATGCATTGCAGTTTAGTCACTTGCACCAAAAGCTGTCATTCAAGGTTGTCCTGAAGGGGCCTCCAATGCCGATGGAGACAATGATATTATCTGCATCACTTGAATGGAAAGACTCTAAACACAGTGTTAGAAGTCCAATAGTTGTCTTTAAACCATCATTGTGA 1713 0.4734 MRRKVIGAKYFNLDPSVPNIDNPSPVDDQGHGTHTASTAAGSTVRGASFYGVGKGTARGGVPSARIAMYKVCWSVGCSDMDMLAGFDEAIADGVNLISVSIGGPSRDFFSDPMAIGAFHAMRRGILTSCSAGNDGPQPTTVENVAPWILTVAASSLDRQFTTLIVLGDGKNTTGISINTFSPKKKMYPLTSGTLAANLSGDGFGNPSGCDYGTLSKDKVKGRIVYCIGGTGGQDLTLKELGGAGTIVGLDQKTDASYTTVIPGAFVEANTAGRTIDLYINSTKNAQAVIHKTTTKQIPAPYLASFSSRGPELITRSILKPDLAAPGLNILAAYSKLATVTGYPEDTRHDVFNIISGTSMSCPHATAAAAYVKSFHPNWSPAAIKSALMTTATPLKISDNYTELGSGSGQINPVKALQPGLVYDIRMNSYIAFLCKQGYNSTSIGILIGSKGFNCKSIKPARGTDGINYPTMHVQLLSLSSSISAVFHRTVTNVGHENSTYKAKVTAPEGLSVEVIPDALQFSHLHQKLSFKVVLKGPPMPMETMILSASLEWKDSKHSVRSPIVVFKPSL* 571
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g03466 570 Gene3D - 157 295 - -
Rops8g03466 570 Gene3D Peptidase S8/S53 domain 3 429 IPR036852 GO:0004252|GO:0006508
Rops8g03466 570 MobiDBLite consensus disorder prediction 16 39 - -
Rops8g03466 570 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 2 565 IPR045051 -
Rops8g03466 570 Gene3D - 433 567 - -
Rops8g03466 570 CDD PA_subtilisin_like 164 289 - -
Rops8g03466 570 Pfam Subtilase family 23 404 IPR000209 GO:0006508|GO:0008236
Rops8g03466 570 PRINTS Subtilisin serine protease family (S8) signature 27 40 IPR015500 -
Rops8g03466 570 PRINTS Subtilisin serine protease family (S8) signature 355 371 IPR015500 -
Rops8g03466 570 ProSiteProfiles Serine proteases, subtilase domain profile. 1 416 - -
Rops8g03466 570 ProSitePatterns Serine proteases, subtilase family, serine active site. 356 366 IPR023828 -
Rops8g03466 570 MobiDBLite consensus disorder prediction 17 39 - -
Rops8g03466 570 Pfam Fibronectin type-III domain 466 565 IPR041469 -
Rops8g03466 570 SUPERFAMILY Subtilisin-like 18 417 IPR036852 GO:0004252|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g03466 Rops-Chr8 74002685 74005061 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g03466 4 390 Subtilisin-like Serine Gene Family AT5G03620 62.278 2.72e-165 481
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g03466 - - gmx:100793716 909.057