Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g03465 ATGGATGTGGAATCAGACAAGTACTGTGCATCGTCGAGCTCTTCCTCTTCCTCTTCGTCTGCGTGTGCTTCGGAGGAAATTGAGGCGGCGAAGACTCTGGCGCAGTTGGCAATGCGCCACACTGATACCAACAATGCCAAACGAGACACCACGCGTGACTCACCGATTCCTAACTCGGATCCCTCTCCCCCTCCCCTTCGCCTTCGCCCTCGGGGCCAAGCTGTTGCAGGTCAGCAACTAGATGAAAAAATATCCACTGCTACATCAGTAGAGACAGAAAGGATCCAGCAGAATGACTGCTTAAGACACATGAAGGTGGAGCAGGATGCTGATTTACCTAACACTACAAATTACTCTAAGGTTCGCTGCAGCAAGTCTAGGCGTAATTTAACTGAGGAAGAAAAAGAAGAACGGAGGATACGCAGGGTATTGGCAAATCGAGAGTCGGCTAGGCAGACAATTCGCCGGAGGCAGGCTCTGAGTGAGGAATTATCCAGAAAAGCTGCCACTTTAGTGCTGGAAAATGAAAACCTAAAGAGGGAGAAGGAGATAGCTTTGAAAGAGTATCAATCTTTGGAGACTACAAATAAGCACTTAAAGGCACAAATAGCCAAGTCAATAAACACTGAAGTGGAGAAAACTCCTGTTGAGCAGGAGTCATCAGTGGCTGAGGTAACACCTGCGTCTGGCAATGGCAATAGTCCATGGTTTCTTTATAACCATTTTCCAGTTACACAGTTATTTTGGCCCTCCATCCTTCAGTCTTCTAATCCAGTTCAATTACAACATACACCGTTTAATTCCATTGCCCTTCCATCAAATGTTTATGTGCCATGTTCTTCTGAGTCTGAATCATGTCTCAAACAAAATAACCTTATAAATGACAATCAAACACAAAATCCATTGTGCATGTTTCCATGTCCTTGGTTATACCCTCTTCCAGAGTTTGGAAATGGACAATCACCACCTTCCAGTGGCCTAAAAGATAAACAAGATAAACTTCCTCTAGGTAAACAAAGTAGTACTAGTTTATCTTTAAATACAGTGGCAAATGGGGATTATCAAGAAGCTCTACCTATCAAACTTAAAACAGAAGCTTCTGGCTGGACAGAAGCCAGATCTATTAATGACCCTGGCCATGCCACTCCAAGTTTTTCTTTGGATGGACGTGAACAGAAAACAAGATGTGACGTTACTGGAAAATTCCATGGACCCCAACTTAGTTGTAATGGTCACGCTTCTGCTGTCAAGCAAGAACCTGAGATTCAATTACATTCTGCTCCGAACACTAATGTAACTTCAACAGCTTCTCATACTGCAACTTCTTCACTGAAAAATAAACAAGAACAGTTCGTATGCCCTGGTAAAAATATGGTGGATGCAGTTGCTGCGGCAGAGGCAAGAAAGAGGAGAAAGGAACTAAAAAAGCTAAAAAGCACCCATAGTCGCCAGGCCCGGATGGAGTGTTAA 1470 0.4395 MDVESDKYCASSSSSSSSSSACASEEIEAAKTLAQLAMRHTDTNNAKRDTTRDSPIPNSDPSPPPLRLRPRGQAVAGQQLDEKISTATSVETERIQQNDCLRHMKVEQDADLPNTTNYSKVRCSKSRRNLTEEEKEERRIRRVLANRESARQTIRRRQALSEELSRKAATLVLENENLKREKEIALKEYQSLETTNKHLKAQIAKSINTEVEKTPVEQESSVAEVTPASGNGNSPWFLYNHFPVTQLFWPSILQSSNPVQLQHTPFNSIALPSNVYVPCSSESESCLKQNNLINDNQTQNPLCMFPCPWLYPLPEFGNGQSPPSSGLKDKQDKLPLGKQSSTSLSLNTVANGDYQEALPIKLKTEASGWTEARSINDPGHATPSFSLDGREQKTRCDVTGKFHGPQLSCNGHASAVKQEPEIQLHSAPNTNVTSTASHTATSSLKNKQEQFVCPGKNMVDAVAAAEARKRRKELKKLKSTHSRQARMEC* 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g03465 489 CDD bZIP_plant_GBF1 144 190 IPR045314 GO:0003700|GO:0006355
Rops8g03465 489 Coils Coil 133 153 - -
Rops8g03465 489 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 22 - -
Rops8g03465 489 MobiDBLite consensus disorder prediction 318 341 - -
Rops8g03465 489 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 136 199 IPR004827 GO:0003700|GO:0006355
Rops8g03465 489 MobiDBLite consensus disorder prediction 1 80 - -
Rops8g03465 489 Coils Coil 464 484 - -
Rops8g03465 489 PANTHER G-BOX-BINDING FACTOR 3-RELATED 12 233 IPR044827 GO:0003700|GO:0006355|GO:0043565
Rops8g03465 489 MobiDBLite consensus disorder prediction 425 449 - -
Rops8g03465 489 Coils Coil 161 202 - -
Rops8g03465 489 MobiDBLite consensus disorder prediction 7 25 - -
Rops8g03465 489 SMART brlzneu 134 198 IPR004827 GO:0003700|GO:0006355
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g03465 123 489 bZIP Transcription Factor Family AT1G19490 36.413 4.62e-50 176
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g03465 - - gmx:100788624 607.831
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops8g03465 8 73997609 74002567 Rops8g03465 8 73997609 74002567 ECH