Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g03461 ATGGGTTCATTCTCTGGCACTTGTGAAATAGTTGAAGCTAGGGAGGAGCTAAGCAAAGGGAAAGCTGTAAGGATTTATCAGTCCACTTCTCAGAATAGCACGACTGAGAAAAATCAGAAGCCTTCCGTGCTGAACCTGGGATACAAGGATAATCTAGATGATGATATTAGTAAGTTGTTTGAATCAATTGCTCTTAAGTCTTCATCAAGGGATTTGGACCTATTACCAGATGGTACAAGCCCCAAGCTGAAAAATACATTAAAAAAGCCAATCACAATGGGTGTTCCTCGGTCCCCACGAGTTGGGAGTTCTGAGCCTGTTAATTTGAAGCAGGCATTGAGAGACCTTTGTATATCTAAGGCATCAGGAATGGCTGCTATGAAACGATTATCAAAATCAACAGCTTCTCCAAGAATGTCGGAGGTTGGGAAGATACAAACTCTGTACAATTCAGTTGTAGCTGAAACCTGTCAATCTGGGCCTTCTGTTGTTGAGAGTAAGGAGCGTAGAATGGAAATATCTCTAGTGCCAGAAAAAAGCAAGTCACCCTCCTTGGAGAAAACATTTCAATCTCATCAAACAGGGCAAAGCACATCATTGAGCCAAACCATTCATTCTTCTCGGGAAATTGCTGTTGCAACTACTCAACACTATTCCGGTTCTTCATCAAGGCAAAATGATTTGGCATGTTCATCAAGTAAAGTTGTTCCTATTCAAGCAGAAAAACAAACATCTGCATCCTCTCCATCTCTTAATAAGAAGTTTGGAAGCAAATTAGAGTTGCCTGAAAATGCTTCTTCCACTAAAATGTTAGGAAATAAAGTGTTCATGTCAAATGCGGGGCGGAAAGGTAGGTTGCAAACAGTAACTTCTTCATCTACTTCAGCAAATGGCAGCACATCTGACAAACAGCCACGCCACGCCCCTCATACAGTTAAGACGGTCATCAAGAACAAGAATCTGAGTAAGAAGAAAGTGAAGGAGAATTCAGGTTCTGCTTTATGTAATCCTACATCCGATGAAGTTAATAAGCCAGTTCCAGGTACAGCTCGGCTGGTTTGTGAGAGATGTAGGTGTGCTTTAGAAAATACAAGGGAAGAAAAAGACCAAGATATTATGGCGTCAGAGGCTACCAGTCCTGTTAATGGAGTAAACTTGAGTAATGTGCACTCTGGTTCAAATAAACCTGATTTGGCATCAACTAGCGGTAATAAAAGCAAAGCTGTTGCAAAAGTGAAGAAGAACACCAAGTTGAAAGAGCAACTTGAATTTTCACAAAGTTCAAAAAGTAGTCAAGGTGAATACAGTAGTAGTACAAGTACCAGTGACGAGAGCAATATGAGTGGCTCAAGTTGTGGCACTAGGCCTCACATGTCAAAGGATGTTAGGTGGGAAGCCATTCGACATGCTCAAATGCAGTATGGAGCCTTGGGCTTGAGACACTTCAATCTTTTGAAGAAACTTGGTTGTGGAGACATTGGGACTGTATATCTTGCTGAACTAATTGGCACAAGTTGCTTGTTTGCTATTAAGGTCATGGACAATGAATTTTTGGCAAGAAGGAAGAAGATGCCTAGGGCTCAAACTGAAAGAGAAATATTACGGATGCTGGATCATCCATTTCTTCCCACACTGTACGTGCAATTTACATCAGATAATCTATCATGTCTGGTCATGGAGTATTGTCCAGGTGGAGATCTTCATGTTCTACGGCAGAAGCAGCTTGGTAGAAGTTTTTCGGAGCCAGCAGCAAGGAATGTAATCTTCCTCCGGGATCCACCTCTAACTGCCACTGCATCTGTATTTCTTAAACCTGCAGCATTCGCCACTAGTGTGAACTCTGTTCTTGATTGCCCTTTGTTTAGGATTCATGAAGGAGAGATTGTTTCAATTAGTCATTCATTTTAG 1908 0.4146 MGSFSGTCEIVEAREELSKGKAVRIYQSTSQNSTTEKNQKPSVLNLGYKDNLDDDISKLFESIALKSSSRDLDLLPDGTSPKLKNTLKKPITMGVPRSPRVGSSEPVNLKQALRDLCISKASGMAAMKRLSKSTASPRMSEVGKIQTLYNSVVAETCQSGPSVVESKERRMEISLVPEKSKSPSLEKTFQSHQTGQSTSLSQTIHSSREIAVATTQHYSGSSSRQNDLACSSSKVVPIQAEKQTSASSPSLNKKFGSKLELPENASSTKMLGNKVFMSNAGRKGRLQTVTSSSTSANGSTSDKQPRHAPHTVKTVIKNKNLSKKKVKENSGSALCNPTSDEVNKPVPGTARLVCERCRCALENTREEKDQDIMASEATSPVNGVNLSNVHSGSNKPDLASTSGNKSKAVAKVKKNTKLKEQLEFSQSSKSSQGEYSSSTSTSDESNMSGSSCGTRPHMSKDVRWEAIRHAQMQYGALGLRHFNLLKKLGCGDIGTVYLAELIGTSCLFAIKVMDNEFLARRKKMPRAQTEREILRMLDHPFLPTLYVQFTSDNLSCLVMEYCPGGDLHVLRQKQLGRSFSEPAARNVIFLRDPPLTATASVFLKPAAFATSVNSVLDCPLFRIHEGEIVSISHSF* 636
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g03461 635 MobiDBLite consensus disorder prediction 421 455 - -
Rops8g03461 635 MobiDBLite consensus disorder prediction 81 104 - -
Rops8g03461 635 SMART serkin_6 482 635 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops8g03461 635 SUPERFAMILY Protein kinase-like (PK-like) 457 587 IPR011009 -
Rops8g03461 635 MobiDBLite consensus disorder prediction 279 313 - -
Rops8g03461 635 MobiDBLite consensus disorder prediction 181 204 - -
Rops8g03461 635 MobiDBLite consensus disorder prediction 283 305 - -
Rops8g03461 635 MobiDBLite consensus disorder prediction 176 204 - -
Rops8g03461 635 FunFam Serine/threonine-protein kinase D6PK-like 480 565 - -
Rops8g03461 635 Gene3D Phosphorylase Kinase; domain 1 476 594 - -
Rops8g03461 635 MobiDBLite consensus disorder prediction 366 457 - -
Rops8g03461 635 ProSiteProfiles Protein kinase domain profile. 482 635 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops8g03461 635 Pfam Protein kinase domain 483 587 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops8g03461 635 PANTHER FLIPPASE KINASE 1-RELATED 248 585 - -
Rops8g03461 635 MobiDBLite consensus disorder prediction 375 409 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g03461 Rops-Chr8 73942758 73946340 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g03461 1 588 AGC Kinase Gene Family AT3G52890 43.628 2.47e-131 407
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Rops8g03461 Pkinase 6.2e-14 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g03461 - K08286 gmx:100792120 809.675
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops6g00897 6 22201148 22202941 Rops8g03461 8 73942758 73946340 ECH
Rops8g03461 8 73942758 73946340 Rops8g03461 8 73942758 73946340 ECH
Rops8g03461 8 73942758 73946340 Rops6g00897 6 22201148 22202941 PCT