Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g03448 ATGATGGCTCAGAAGTACTTACATGAGTTACTGAAGGAGGATCAAGAACCGTTCCATCTTAACAAGTACATTTCTGATAGGCGAAGCGAAATGAAAAGGCCTTCTTTCAAGACTAGTTTGCAACCGAAGAAAAGGAAATCAATTATTCAAAACTCAAACTTCCCTGGTAATCTTTGTAAAAATGCTTGTCTTTTTTCCATCACAGACACCCCAAACCTTAGAAAATCTCCACTGTTCGAATTTGCATCACCAGCCAAAAGCCCCTGCAAGTCACCAAATGCTATTTTTCTCCAAATTCCTTCTAGAACTGCAGCTCTTCTTCTTGAAGCTGCTCTAAGGATCCAGAAACAGTCATCAGCTCCAAGTTCCAAATCCAAAACCAAAACCAAAGGTTTGGGGTCCTTATTCAAGAGACTAACTCAAAGAAACCAGAACCGCAAGAGGGAAATAGAGGGTGGTAATGGGAGCAACAAAGAGCGAGATAAAAAGATGGATTCTGAAATGGACAACAACAACAACATGGTATCTGAGGTGGTGGGGTTTCATTGTTCTTACAATGGAAGGCCTAGTAGTGCTGTTTGGTCGGAGAGTAATGAAGATAAATCTCTTGACATGGGAACTTCGAGTAGTACTAGCAACTCTGATGACTCTGAAGGGATTCACTTTGTAACAAATCAAGAGGAGTTTGCTTGCTGCAGCCATGTCTTCTGTGAAAGCCCTTTCCGTTTTGTTCTTCAAACGAGTCCTTCCTCCGGTCACCAGACGCCGGAGTTAATGTCGCCGAGTCGCCACATAACAGAGGACAAAGAAAGTAATGGAGGAGTTGAGAGCCTTAAGAAATTTGAGGCAGGGGAAGAAGAGGAAGAAGATAAGGAACAGTGCAGTCCAGTGTCTGTTTTAGACCCACCCTTCGAGGACGATGATGAAGTGCATGGAAACGATGATGAAGATGATGATGGTTTTGAATTGGAGAGCAACTATGCCATTCTACAGAGAGCTAAACAGCAGCTATTGTACAAGCTTCGCAGATTTGAGAAACTAGCAGAGTTAGATCCAGTAGAACTTGAGAGAAGAATGCTGGATCAAGAAGAGGACGAGGATGATCATGAAGATGAGGATAGCGAACCATCGTATAAAGAAAATGACTTCAGAGAATTAGTTTTGGAAGCTGTCTGCCAGTTAAGGGTGGTCAATGACAAACAGCAAATCCCAAAAGAGTTTAAGAAACTGATTTATGATCTTATTGTGGAAGAAGAGAGAGAACTGGATTCCTTAGAAGATAGGGACATGGTGATAAAACAAATATGCAAGAGGCTGGAATTGTGGAAAGAAGTGGAGTCTAACACAATTGATATGATGATAGAAGAGGACTTCTCTAGAGAGAATGATGGGTGGAAGAAGAATGTAGAGCAGGTAAGAAAGATGGCTGGCGAGCTCGAGCTTTCTATCTTTGGCTTTTTGGTGGAGGAATTTTCAGAGGAACTAGTTTGTTAA 1494 0.4183 MMAQKYLHELLKEDQEPFHLNKYISDRRSEMKRPSFKTSLQPKKRKSIIQNSNFPGNLCKNACLFSITDTPNLRKSPLFEFASPAKSPCKSPNAIFLQIPSRTAALLLEAALRIQKQSSAPSSKSKTKTKGLGSLFKRLTQRNQNRKREIEGGNGSNKERDKKMDSEMDNNNNMVSEVVGFHCSYNGRPSSAVWSESNEDKSLDMGTSSSTSNSDDSEGIHFVTNQEEFACCSHVFCESPFRFVLQTSPSSGHQTPELMSPSRHITEDKESNGGVESLKKFEAGEEEEEDKEQCSPVSVLDPPFEDDDEVHGNDDEDDDGFELESNYAILQRAKQQLLYKLRRFEKLAELDPVELERRMLDQEEDEDDHEDEDSEPSYKENDFRELVLEAVCQLRVVNDKQQIPKEFKKLIYDLIVEEERELDSLEDRDMVIKQICKRLELWKEVESNTIDMMIEEDFSRENDGWKKNVEQVRKMAGELELSIFGFLVEEFSEELVC* 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g03448 497 MobiDBLite consensus disorder prediction 358 380 - -
Rops8g03448 497 MobiDBLite consensus disorder prediction 142 168 - -
Rops8g03448 497 MobiDBLite consensus disorder prediction 192 218 - -
Rops8g03448 497 MobiDBLite consensus disorder prediction 116 170 - -
Rops8g03448 497 MobiDBLite consensus disorder prediction 262 286 - -
Rops8g03448 497 PANTHER OS04G0572500 PROTEIN 2 495 - -
Rops8g03448 497 MobiDBLite consensus disorder prediction 248 320 - -
Rops8g03448 497 Coils Coil 408 428 - -
Rops8g03448 497 MobiDBLite consensus disorder prediction 360 375 - -
Rops8g03448 497 MobiDBLite consensus disorder prediction 116 140 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g03448 Rops-Chr8 73739703 73742910 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g03448 1 305 TRM (TON1 Recruiting Motif) Superfamily AT5G03670 40.116 5.40e-53 182
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g03448 - - gmx:100790018 608.216
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops8g03448 8 73739703 73742910 Rops8g03448 8 73739703 73742910 ECH
Rops8g03448 8 73739703 73742910 Rops6g00900 6 22243949 22247250 PCT