Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g03435 ATGGAAATGCCTGTTAGAAGATCCAACTACTCACTCGTGAGCCAAACTCCCGACGAGTACCAGTTCGGCCAAACCGCTACACCATCGTTGTTCGATTCTTCCTCCGGCGACGGCAACACCAACAAGAGCAAGTTGGATAGGGCCTTTGACTGGGACTCACTTTCCGATCACAGGCTCGCTCAGCAAGGGAACCGGATCGGGAATCTGTACTCCTCGATCGGGTTGCAGAGGCAATCTAGCGGTAGCAGTTACGGTGAGAGCTCCCTTTCCGGCGAGTTTTACGCTCCGACTCTTTCAACCGCCGTTGCCAGTGAGATCGATACCTTTGGTTACGATGGATTCAAAATCGGTGGTGGCGAGGTTAGAACAAAGTTTCTGGAGACTGCAGCGGCGATCACCGGAGGTTCCGCCGGTAAGAGCTGGGCGCAGCAAACGGAGGAGAGTTACCGGTTACAGCTGGCTCTAGCACTTCGGCTTTCTACGGAGGCGACGTGTGCTGATGATCCCAATTTTCTTGATCCGATGCCGGACGAAACTGCTTTGAGGTCTTCCCCGTCGTGTTCAGCAGAGGCAGTGTCGCATAGGTTTTGGGTGAATGGCTGCCTATCATACTTCGACAAAATTCCTGATGGCTTTTATCTAATTCACGGGATGGATCCCTATGTATGGACCATGTGCACTGATCTGCAGGAAAATGGCCGAATTCCATCATTTGAGACACTAAAATCTATAAATCCCTCTTCTGATTCTTCACTTGAAGTAGTTTTGGTGGATAGACGTAGTGATCCTAGCTTAAAAGAACTTCAACATAGGGTACATAACATTTCTTGTAGCTGCATAACAACAACAGAGGTTGTAGACCAGCTTGCCAAGCTGGTTTCCAATTTCATGGGGGGTTCAGCTTCTGTTGGCGAAGATAACTTTTTTTCCATATGGAGGGAGCGCATTAATGACCTAAGAGATTGCTTAGGATCTGTTGTTGTTCCAATTGGTAGTCTATCTATTGGGCTTTGCAGGCATCGTGCTATACTATTCAAAGTACTAGCTGACACCATTGATTTACCATGTCGAATTGCAAAGGGCTGTAAATATTGCTCAAGAGATGACGCCTCTTCATGTCTTGTTCGAATTGGGCTTGACAGGGAATATATGGTTGATCTAATTGGGAAGCCGGGTTGCTTATGTGAGCCTGATTCCTTGCTCAATGGTCCATCTTCCATCTCATTTTCTTCACCCTTGCGCTTTCCAAGACTTAAACCAGCTGAACCTACCATTGATTTCAGGTCACTGGCCAAACAGTATTTCTCAGATTGTCTGTCTCTTGAGCTTGTCTTTGATAATGGTTCTGCAGGACCTGTTATTGATGGAGATTTTGGATTCTGCATTCCAGAAAAATATGATGGGAAGTGCAGGGACAGGAACCCTGGGCCAATTCCAAATGATGGCAACAGAAGTTCTCTCACTCCTCGGCATCCACAAGCTTATCATCCAAGCCCACATTATCAAGGCTCTGAAACATTTAGATCAGGTAACCTTCCTCAGGACATTGTAGAATGGACAACTGTGGACAAGGATGGACTCCCTTTAAAGCATAACTGGCCTGGTCACAGAGAGACGCTAACCCCATTAGCACAAACAAATCTCAATGTGGATTTTATCGAAGGTGGGAGGTTTGTTGAAGGAAGTCAACTGATTCCTAGAAAACCTACTAATAGAGAGCTTGCCTTTGATATGGAAGATTTGGACATACCGTGGAGTGATCTTGTTTTAAAAGAGAAAATAGGATCAGGTTCTTTTGGGACTGTACACCATGCTGAGTGGAATGGCTCGGAGGTTGCTGTAAAAATTCTGATGGAACAAGACTTTCATGCTGAACGCTTCAAGGAATTTCTGAGGGAGGTTGCAATAATGAAACACTTGCGGCATCCAAACATCGTTTTATTGATGGGTGCAGTCACAAAGCCTCCTCATTTATCAATTGTCACAGAATATCTGTCAAGGGGTAGCTTATATAGGCTGTTGCATAAACCTGGCGCCAGAGAGATGTTGGATGAGAGGCGTAGGCTTCATATGGCTTATGATGTGGCTAAGGGGATGAACTATCTTCATAAACGTAATCCTCCCATTGTTCATAGAGATCTGAAATCTCCAAACCTTCTTGTGGACAAGAAATATACAGTAAAGGTTTGTGATTTTGGGCTTTCTCGATTAAAGGCAAATACATTTCTCTCATCCAAGTCAGCTGCTGGGACTCCTGAGTGGATGGCTCCAGAAGTTCTTCGTAATGAACCATCCAATGAGAAGTCAGATGTTTACAGCTTTGGTGTCATTTTATGGGAGCTTGCAACATTGCAACAGCCATGGGGTAATTTGAATCCAGCTCAGGTTGTATTTGCTGTTGGTTTTAAGGGAAAAAGGCTTGAGATACCGCGTGATTTGAATCCCCATATAGCCTCAATAATTGAGGCTTGCTGGGCCAATGAGCCCTGGAAACGCCCTTCATTTGCAAGTATTATGGATTCTATAAAAGTATTGCTCCAACCCCCGACACCACAACCTGGTCGTCCAAACATGCCATTGCTTACCTGA 2589 0.4542 MEMPVRRSNYSLVSQTPDEYQFGQTATPSLFDSSSGDGNTNKSKLDRAFDWDSLSDHRLAQQGNRIGNLYSSIGLQRQSSGSSYGESSLSGEFYAPTLSTAVASEIDTFGYDGFKIGGGEVRTKFLETAAAITGGSAGKSWAQQTEESYRLQLALALRLSTEATCADDPNFLDPMPDETALRSSPSCSAEAVSHRFWVNGCLSYFDKIPDGFYLIHGMDPYVWTMCTDLQENGRIPSFETLKSINPSSDSSLEVVLVDRRSDPSLKELQHRVHNISCSCITTTEVVDQLAKLVSNFMGGSASVGEDNFFSIWRERINDLRDCLGSVVVPIGSLSIGLCRHRAILFKVLADTIDLPCRIAKGCKYCSRDDASSCLVRIGLDREYMVDLIGKPGCLCEPDSLLNGPSSISFSSPLRFPRLKPAEPTIDFRSLAKQYFSDCLSLELVFDNGSAGPVIDGDFGFCIPEKYDGKCRDRNPGPIPNDGNRSSLTPRHPQAYHPSPHYQGSETFRSGNLPQDIVEWTTVDKDGLPLKHNWPGHRETLTPLAQTNLNVDFIEGGRFVEGSQLIPRKPTNRELAFDMEDLDIPWSDLVLKEKIGSGSFGTVHHAEWNGSEVAVKILMEQDFHAERFKEFLREVAIMKHLRHPNIVLLMGAVTKPPHLSIVTEYLSRGSLYRLLHKPGAREMLDERRRLHMAYDVAKGMNYLHKRNPPIVHRDLKSPNLLVDKKYTVKVCDFGLSRLKANTFLSSKSAAGTPEWMAPEVLRNEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQVVFAVGFKGKRLEIPRDLNPHIASIIEACWANEPWKRPSFASIMDSIKVLLQPPTPQPGRPNMPLLT* 863
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g03435 862 ProSitePatterns Serine/Threonine protein kinases active-site signature. 709 721 IPR008271 GO:0004672|GO:0006468
Rops8g03435 862 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 167 842 - -
Rops8g03435 862 PRINTS Tyrosine kinase catalytic domain signature 813 835 IPR001245 GO:0004672|GO:0006468
Rops8g03435 862 PRINTS Tyrosine kinase catalytic domain signature 703 721 IPR001245 GO:0004672|GO:0006468
Rops8g03435 862 PRINTS Tyrosine kinase catalytic domain signature 750 760 IPR001245 GO:0004672|GO:0006468
Rops8g03435 862 PRINTS Tyrosine kinase catalytic domain signature 769 791 IPR001245 GO:0004672|GO:0006468
Rops8g03435 862 PRINTS Tyrosine kinase catalytic domain signature 662 675 IPR001245 GO:0004672|GO:0006468
Rops8g03435 862 ProSitePatterns Protein kinases ATP-binding region signature. 594 615 IPR017441 GO:0005524
Rops8g03435 862 FunFam Serine/threonine-protein kinase CTR1 667 852 - -
Rops8g03435 862 Pfam Protein tyrosine and serine/threonine kinase 589 841 IPR001245 GO:0004672|GO:0006468
Rops8g03435 862 ProSiteProfiles Protein kinase domain profile. 588 846 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops8g03435 862 CDD STKc_MAP3K-like 594 842 - -
Rops8g03435 862 SMART serkin_6 588 846 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops8g03435 862 MobiDBLite consensus disorder prediction 471 501 - -
Rops8g03435 862 SUPERFAMILY Protein kinase-like (PK-like) 570 840 IPR011009 -
Rops8g03435 862 Pfam Ethylene-responsive protein kinase Le-CTR1 189 395 - -
Rops8g03435 862 Gene3D Transferase(Phosphotransferase) domain 1 667 850 - -
Rops8g03435 862 FunFam Serine/threonine-protein kinase isoform 1 578 666 - -
Rops8g03435 862 Gene3D Phosphorylase Kinase; domain 1 581 666 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g03435 Rops-Chr8 73531452 73549312 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g03435 1 858 MAP Kinase Kinase Kinase AT5G03730 64.432 0.0 991
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Rops8g03435 PK_Tyr_Ser-Thr 3.8e-71 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g03435 K14510 - gmx:100810555 1296.57