Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g03424 ATGGTATGGGCTTCAGATCATCCCCTACTGATTCTCCTACTCTTGTCTTTCCCTCTGCTCTTCTTCCTCTTCAGCCGCCGCAGCAAAATCTCAGCCTCCAACCGCCGCCATCCACCTGGACCGGCGGGATGGCCCATATTCGGGAACATGTTTCAGCTGGGAGAGATGCCTCACCGCACCCTCACCGATCTAAGGGACAAGTACGGCCCCGTGGTATGGCTCAAAATAGGTGCCGTAAACACCATGGCAATACTCTCTGCCAAAGCCGCCACCGTTTTTTTCAAAAACCACGACCACACCTTCGCCGACCGAACTGTAAACGAAACCATGCGCGCCCATAACTACGACAAGTCGTCTTTGGCCTTGGCTCCTTACAGCTCCTCCTACTGGCGCCTCATGCGTCGCCTCGTCACCGTTGACATGGTGGTAGCAAAACGCATCAACGACACCGCCCACGTTCGCCGGAGATGCGTGAACGACATGCTGACGTGGGTGGCAAAAGAAGCAAGCAAGTTAGAAGAGGGTCGCGGGCTTCACGTGGCGCGTTTCATCTTCCTCATGACCTTCAACCTGTTCGGCAACCTGATGTTGTCGCGTGACCTATTCAACCCGGAATCCGAAACCGGGTCGGAATTCTTCACGGCGATGATGGGGCTGCTGGAATGGACGGGGCACGCCAACGTAGCGGACTTTTTCCCGTGGCTGCGGTGGTTGGACCCGCAAGGCCTCAGGAAAAAAATGGACAGAGATATGGGGAAAGCTCTGAAAATTGCTTCCAGGTTGGTGAAAGAACGTTTGGAGGAGCAGCGTGAGAACAGATCAAGGGACTTCTTGGATCTCTTGCTTGAGTTTCAGAGAAGTGAGAGTGAACACGTCACAGATAAAGACATCAACATTTTCATATTGGAAATGTTCATGGCTGGGTCAGAAACAACTAGCAGCACGATTGAATGGGCTTTGACGGAGCTTCTGTGCAACCGTGAATGTATGTTGAAGGCCAAAAGGGAGCTTAGTTCGGTGGTTAGAGATAGAGAAGTTGAGGAAAGTGACATAGACAACCTTTCCTACCTGCAATATGTGGTTAAGGAAACACTAAGGTTGCATCCTCCGATTCCTCTGCTTGTTCCTCGAAGGGCGGTGGAGGACACAGAGTTCATGGGGTACTTCATACCGAAAGACACACAGGTTTTTGTGAATGCATGGGCAATAGGAAGAGACCCTGATGTGTGGGATGAGCCATTGGCCTTCAAGCCCGAGAGGTTTAGTGGTTGCAAGACTGATTATAAAGGACAACACTACGAGCTGATACCCTTCGGGGCTGGAAGAAGAATGTGTGCTGGAGTGCCATTGGGTCACAGAGTGCTTCACTTGGTCTTAGGATCGTTGCTTCATCGATTCGATTGGGAACTTGATAGCAGTGTCACGCCATCAACCATGGACATGAAGGATAAGCTGGGCGTAACCATGCGAAAGCTTGAACCTTTGCTTGCGGTGCCAAAATTAACTACTTCATCATGA 1518 0.5119 MVWASDHPLLILLLLSFPLLFFLFSRRSKISASNRRHPPGPAGWPIFGNMFQLGEMPHRTLTDLRDKYGPVVWLKIGAVNTMAILSAKAATVFFKNHDHTFADRTVNETMRAHNYDKSSLALAPYSSSYWRLMRRLVTVDMVVAKRINDTAHVRRRCVNDMLTWVAKEASKLEEGRGLHVARFIFLMTFNLFGNLMLSRDLFNPESETGSEFFTAMMGLLEWTGHANVADFFPWLRWLDPQGLRKKMDRDMGKALKIASRLVKERLEEQRENRSRDFLDLLLEFQRSESEHVTDKDINIFILEMFMAGSETTSSTIEWALTELLCNRECMLKAKRELSSVVRDREVEESDIDNLSYLQYVVKETLRLHPPIPLLVPRRAVEDTEFMGYFIPKDTQVFVNAWAIGRDPDVWDEPLAFKPERFSGCKTDYKGQHYELIPFGAGRRMCAGVPLGHRVLHLVLGSLLHRFDWELDSSVTPSTMDMKDKLGVTMRKLEPLLAVPKLTTSS* 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g03424 505 FunFam Cytochrome P450 76C4 29 498 - -
Rops8g03424 505 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 438 447 IPR017972 GO:0005506|GO:0016705
Rops8g03424 505 Gene3D Cytochrome P450 24 496 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops8g03424 505 Pfam Cytochrome P450 38 490 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops8g03424 505 PRINTS E-class P450 group I signature 445 468 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops8g03424 505 PRINTS E-class P450 group I signature 358 376 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops8g03424 505 PRINTS E-class P450 group I signature 65 84 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops8g03424 505 PRINTS E-class P450 group I signature 316 342 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops8g03424 505 PRINTS E-class P450 group I signature 399 423 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops8g03424 505 PRINTS E-class P450 group I signature 435 445 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops8g03424 505 PRINTS E-class P450 group I signature 296 313 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops8g03424 505 SUPERFAMILY Cytochrome P450 38 498 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops8g03424 505 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 12 500 - -
Rops8g03424 505 CDD CYP76-like 67 499 - -
Rops8g03424 505 PRINTS P450 superfamily signature 307 324 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops8g03424 505 PRINTS P450 superfamily signature 436 445 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops8g03424 505 PRINTS P450 superfamily signature 359 370 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g03424 Rops-Chr8 73327477 73329153 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g03424 10 499 Cytochrome P450 AT3G52970 42.418 7.06e-137 404
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g03424 K22983 - gmx:100785241 805.053