Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g03423 ATGGTCTGGCCTTCATATCATCCTCTACTTATTCTCCTACTCTTGTTTATCCCTCTGCTCTTCTTCCTCTTCAACCGCCGCCACAAAATCTCAGCCTCCAACCGCCGCCTTCCACCGGGACCGTCGGGATGGCCCATATTCGGGAACATGTTCCAGTTGGGAGAGATGCCTCACCGCACCCTCACCAACCTAAGGGACAAGTACGGTCCCGTGGTGTGGCTCCAAATAGGAGCCAAAAACACCATGACAATACTCTCCTCCAAAGCTGCCTCCGTTTTTTTCAAAAACCACGACCACAACTTCGCTGACCGAACCATAATCGAGACCATGCGCTCCCATAACTACTACAAGTCCTCCTTGGCCTTGGCTCCTTACGGCTCCTACTGGCGCATCATGCGTCGCCTCGTCACCGTCGACATGCTGGTCTCAAAACGCATCAACGACACCGCCCAAGTTCGCCGAAGATGCGTGAACGACATGCTGACATGGGTGGCAAAAGAAGCAAGCAAGTTGGAACAGGGTCGAGGGCTTCACGTGGCGCGTTTCATCTTCCTCTCGACCTTCAACATGTTCGGGAACCTGATGCTGTCACGTGATCTGTTTGACCCGGAATCCGAAGTCGGGTCGGAGTTCTTCTCGGTGATGAGGAGGTTGATGGAATGGTCGGGACACACCAACGTGGCTGACTTGTTCCCGTGGCTGCGGTGGTTGGACCCGCAGGGCCTAAGGAAAAAAACGGATAGGGATATGGGGAAAGCTTTGAGAATCGCTTCTAGGTTTGTGAAAGAACGTTCGGAGGAGCAGCAAGAGCACAAGTCAAAAGACTTCTTGGATGTCTTGCTTGAGTTTCAAAGTCAAGAGGCACTCAACATCACAGATAATGACATCAACATTTTCATATTGGAAATATTTTTGGCTGGGTCAGAAACAACTAGCAGCACAATTGAATGGGCTTTGACGGAGCTACTATGCAACCATGAGTGTATGTTGAAGGTCAAAAGTGAGCTTAGTTCAGTGGCTGGTGATAGAGAATTTGAGGAGGGCGACATAGAAAACCTTCCCTACCTGCAGGCTGTGGTTAAGGAAACACTTCGGTTGCATCCTCCGCTCCCACTACTTGTCCCTCGAAGGGCAGTGCAGGACACAGAGTTCATGGGGTACTTCATACCAAAAGACACACAGGTTTTTGTGAATGCATGGGCAATAGGAAGAGACCCTGATGTGTGGGATGAACCATTGGCCTTCAAGCCCCAGAGGTTTATTGGTTGCAAGACTGATTATAAGGGGCAACACTATGAGCTGATCCCATTCGGCGCTGGAAGAAGAATGTGTGTTGGCGTGCCGTTGGCTCAAAGAATACTTCACCTGGTCTTGGGATCATTGCTTCACAGATTTGATTGGGAACTTGATAGTCGTGTTACTCCATCAACCATGGATATGAAGGAGAGGCTAGGCTTAGCCATGCGAAAGCTTGAACCCTTGCTTGCGGTGCCAAAATTAATCGCTTTTACATCATGA 1518 0.4993 MVWPSYHPLLILLLLFIPLLFFLFNRRHKISASNRRLPPGPSGWPIFGNMFQLGEMPHRTLTNLRDKYGPVVWLQIGAKNTMTILSSKAASVFFKNHDHNFADRTIIETMRSHNYYKSSLALAPYGSYWRIMRRLVTVDMLVSKRINDTAQVRRRCVNDMLTWVAKEASKLEQGRGLHVARFIFLSTFNMFGNLMLSRDLFDPESEVGSEFFSVMRRLMEWSGHTNVADLFPWLRWLDPQGLRKKTDRDMGKALRIASRFVKERSEEQQEHKSKDFLDVLLEFQSQEALNITDNDINIFILEIFLAGSETTSSTIEWALTELLCNHECMLKVKSELSSVAGDREFEEGDIENLPYLQAVVKETLRLHPPLPLLVPRRAVQDTEFMGYFIPKDTQVFVNAWAIGRDPDVWDEPLAFKPQRFIGCKTDYKGQHYELIPFGAGRRMCVGVPLAQRILHLVLGSLLHRFDWELDSRVTPSTMDMKERLGLAMRKLEPLLAVPKLIAFTS* 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g03423 505 PRINTS E-class P450 group I signature 434 444 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops8g03423 505 PRINTS E-class P450 group I signature 398 422 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops8g03423 505 PRINTS E-class P450 group I signature 295 312 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops8g03423 505 PRINTS E-class P450 group I signature 315 341 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops8g03423 505 PRINTS E-class P450 group I signature 357 375 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops8g03423 505 PRINTS E-class P450 group I signature 65 84 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops8g03423 505 PRINTS E-class P450 group I signature 444 467 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops8g03423 505 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 13 499 - -
Rops8g03423 505 SUPERFAMILY Cytochrome P450 38 497 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops8g03423 505 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 437 446 IPR017972 GO:0005506|GO:0016705
Rops8g03423 505 PRINTS P450 superfamily signature 358 369 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops8g03423 505 PRINTS P450 superfamily signature 306 323 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops8g03423 505 PRINTS P450 superfamily signature 435 444 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops8g03423 505 PRINTS P450 superfamily signature 444 455 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops8g03423 505 Gene3D Cytochrome P450 23 495 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops8g03423 505 CDD CYP76-like 67 498 - -
Rops8g03423 505 Pfam Cytochrome P450 38 490 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops8g03423 505 FunFam Cytochrome P450 76C4 29 497 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g03423 Rops-Chr8 73322757 73325950 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g03423 11 498 Cytochrome P450 AT3G52970 44.660 9.76e-147 429
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g03423 K22983 - gmx:100785241 780.4