Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g03422 ATGAACAAGGTTTGGCCAAAAAACTTGGCATTGGCATTGGCCTTGGCCTTGGCCTTAACCTTCCTATCTCTGATACAGGGTGCACCCCAGAATGATACAAACGCCCTCACCCAATTCCGCCTCCAAACTGATTCCCACGGCTACCTCCTCGGTAACTGGACCGGCGGCGACGCTTGCACCGCCGCATGGCGCGGCGTTCAGTGCTCCCCAAACGGCAGAGTGGTGGGTCTCTCCCTTCCTTCCCTCAATCTCAGAGGCCCCATTGATTCTCTATCACCACTCACCTATTTGCGCTTCCTTGACCTCCACGAAAACCGTTTGAACGGCACCATTGCTCCTATTTCCAACTGCACCAGCTTGGAACTCCTCTACCTCTCCGGTAACGACTTTTCCGGCGAGATGCCGCCGGAAATAGCATCCCTCAAGCTTCTTCTTAGGCTTGACATCTCCGACAACAACATACGAGGCCCAATTCCCAAAAAGCTTTCCAAGTTGACTCATCTTCTCACGTTGAGGTTACAAAACAACGTGCTCACTGGCCAAGTCCCTGATCTTTCTTCTTCCCTTGTTAATCTCAGTGAACTCAACATGACCAACAACGAACTCCATGGACACATACCCGACGCCATGCTCAAGAAATTCGGCAACGCAAGCTTCTCCGGCAATGACGGTCTTTGTGGGTCAACACCCTTGCTGGAATGTTCTTCATCAACCGAAGAAACCGTTCCAACAAACCCAAGCTCGATGCCACAAACAAGGGGTGGTGTTGTTGCACCTCATTCCAAACGAAAAGGATTGAGTCCTGGAAGCATCGTAGCCGTTGTGGTGGTTGTTTGTGTGGTGACAGTGGTGGCGGTGTCTTTCATGGTGGCTCATTGTTGCGCTAGGGGAAGAAGCTCCAACTCGACGGTGGGGAGTGAGAGTGGGAAGAGGAAGAGTGAGAGTAGCTACGGAAGTGAGAAGAAGGGTTATTATGCCAATGGTGGTGTGGATAGAGATAGTGATGGGACCACTGAGACAGAACGAAACAGCAAGCTTGTGTTTTTTGATAGGAAGAGCCCGTTTGAGTTGGAGGATTTGCTTCGAGCATCTGCAGAAATGCTAGGGAAAGGTAGCTTGGGAACGGTTTATAGGGCAGTGCTTGATGATGGATGCACCGTGGCTGTTAAGAGGTTAAAGGACGCAAACCCATGTGAGAGGAACCAGTTTGAACAGTACATGGATGTTGTAGGGAAACTCAAACATCCCAACATTGCCAGACTCAGAGCTTATTACTATGCTAAGGAAGAAAAACTTCTTGTTTATGATTATCTCCCAAATGGAAGCTTGCATGCTCTTCTTCATGGGAACCGGGGTCCTGGAAGGATTCCATTAGATTGGACCACAAGAATAAGCTTGGTATTGGGGGCAGCAAGAGGGCTTGCTAGGATTCATGCAGAGTATAGTGCAGCTAAGATACCTCACGGCAATGTCAAATCTAGCAATGTGCTTCTTGACAAAAACGGGGTTGCTTGCATCTCTGATTTTGGGTTGGCATTACTGTTGAACCCAGTTCATGCCATTACGAGGTTGGGTGGGTACAAAGCTCCTGAACAAGAAGAAGTTAAGAGGTTATCTCAGGAGGCTGATGTGTACAGTTTCGGGGTGTTACTGTTGGAAGTTCTCACTGGGAGAGCTCCGTCTCCGACTCAGTACCCTTGTCCAACTCGTCCTCGGGTGGAGTTAGAGGAACAAGAGATGGATCTTCCCAAATGGGTTAGGTCGATTGTGAAGGAAGAGTGGACTTCAGAGGTGTTTGACCAGGAACTGTTGAGGTACAAGAACATCGAGGAAGAGCTTATGACCATGCTGCATGTGGGGCTAGCTTGTGTGGTGACACAACCTGAGAAGAGGCCAACCATGTTGGAAGTTGTTAAGATGATTGAGGATATCAGGGTGGAACAATCTCCTCTAAGAGAGGATTATGATGAATCACGCAATTCACTTTCACCTTCACTTGCCACCACCGAAGATGGCCTACCTTAG 2025 0.4909 MNKVWPKNLALALALALALTFLSLIQGAPQNDTNALTQFRLQTDSHGYLLGNWTGGDACTAAWRGVQCSPNGRVVGLSLPSLNLRGPIDSLSPLTYLRFLDLHENRLNGTIAPISNCTSLELLYLSGNDFSGEMPPEIASLKLLLRLDISDNNIRGPIPKKLSKLTHLLTLRLQNNVLTGQVPDLSSSLVNLSELNMTNNELHGHIPDAMLKKFGNASFSGNDGLCGSTPLLECSSSTEETVPTNPSSMPQTRGGVVAPHSKRKGLSPGSIVAVVVVVCVVTVVAVSFMVAHCCARGRSSNSTVGSESGKRKSESSYGSEKKGYYANGGVDRDSDGTTETERNSKLVFFDRKSPFELEDLLRASAEMLGKGSLGTVYRAVLDDGCTVAVKRLKDANPCERNQFEQYMDVVGKLKHPNIARLRAYYYAKEEKLLVYDYLPNGSLHALLHGNRGPGRIPLDWTTRISLVLGAARGLARIHAEYSAAKIPHGNVKSSNVLLDKNGVACISDFGLALLLNPVHAITRLGGYKAPEQEEVKRLSQEADVYSFGVLLLEVLTGRAPSPTQYPCPTRPRVELEEQEMDLPKWVRSIVKEEWTSEVFDQELLRYKNIEEELMTMLHVGLACVVTQPEKRPTMLEVVKMIEDIRVEQSPLREDYDESRNSLSPSLATTEDGLP* 675
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g03422 674 FunFam Nuclear pore complex protein NUP107 29 184 - -
Rops8g03422 674 MobiDBLite consensus disorder prediction 236 254 - -
Rops8g03422 674 Gene3D Ribonuclease Inhibitor 29 181 IPR032675 -
Rops8g03422 674 ProSiteProfiles Protein kinase domain profile. 362 646 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops8g03422 674 Gene3D Phosphorylase Kinase; domain 1 332 437 - -
Rops8g03422 674 MobiDBLite consensus disorder prediction 236 263 - -
Rops8g03422 674 MobiDBLite consensus disorder prediction 298 341 - -
Rops8g03422 674 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 438 654 - -
Rops8g03422 674 SUPERFAMILY L domain-like 31 212 - -
Rops8g03422 674 Pfam Protein kinase domain 366 639 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops8g03422 674 Gene3D Transferase(Phosphotransferase) domain 1 438 664 - -
Rops8g03422 674 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 16 646 IPR046959 -
Rops8g03422 674 SUPERFAMILY Protein kinase-like (PK-like) 366 641 IPR011009 -
Rops8g03422 674 CDD STKc_IRAK 368 644 - -
Rops8g03422 674 MobiDBLite consensus disorder prediction 650 674 - -
Rops8g03422 674 FunFam pollen receptor-like kinase 1 332 437 - -
Rops8g03422 674 MobiDBLite consensus disorder prediction 298 312 - -
Rops8g03422 674 Gene3D Ribonuclease Inhibitor 182 235 IPR032675 -
Rops8g03422 674 Pfam Leucine rich repeat N-terminal domain 30 69 IPR013210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g03422 Rops-Chr8 73312396 73315041 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g03422 30 670 Receptor kinase-like Gene Family AT2G36570 65.321 0.0 862
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Rops8g03422 Pkinase 1.5e-32 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g03422 - - gmx:100808402 971.074