Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g03399 ATGGACACAGTGTTGGTACCACCTTGGCTTGAACCACTTCTTCGCACACCCTTCTTCAGTGTTTGTCGGATTCACGCAGATGCTGCAAGGAGTGAATGTAACATGTATTGCCTAGATTGCCATGATGATGCCTTTTGTTTTTATTGTCGTTCTTCAAGACACAAAGATCATCAAATTATTCAGATAAGAAGATCTTCATATCACGATGTAGTGAGGGTCGCAGAAATTCAGAATGTATTGGACATAAGTGGAGTACAAACGTATGTGATCAACAGTGCCAGAGTTTTGTTCTTGAATGTGAGGCCTCAGCCAAAATCTGGAAAAGGAGTAGCTCACATTTGTGAGATTTGTAGAAGAAGCCTCTTGGACCCATTTCGTTTCTGTTCTTTGGGATGTAAGCTTGAAGGAATAAAGAAAAATGGGGATGCAAGCTTTGTTTTGGATGGTAAAAATGAAGCATTGGGGATGTCAAGGAGATCAGTCTCTTCAAGAATGCAAGAAGAAGAATTGCGTGAAGGCTCAACACAAGACATGTATCCGGCTACGCCTCCTCCACCTCCTTCAAATACAAGAAGAAGAAAAGGCATTCCTCATAGGGCCCCTTTTGGCTCTTAA 615 0.4195 MDTVLVPPWLEPLLRTPFFSVCRIHADAARSECNMYCLDCHDDAFCFYCRSSRHKDHQIIQIRRSSYHDVVRVAEIQNVLDISGVQTYVINSARVLFLNVRPQPKSGKGVAHICEICRRSLLDPFRFCSLGCKLEGIKKNGDASFVLDGKNEALGMSRRSVSSRMQEEELREGSTQDMYPATPPPPPSNTRRRKGIPHRAPFGS* 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g03399 204 MobiDBLite consensus disorder prediction 157 204 - -
Rops8g03399 204 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 5 202 - -
Rops8g03399 204 Pfam PLATZ transcription factor 63 134 IPR006734 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g03399 Rops-Chr8 73056871 73058878 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Rops8g03399 PLATZ 1.2e-28 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g03399 - - gmx:100809455 355.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops8g03399 8 73056871 73058878 Rops8g03399 8 73056871 73058878 ECH
Rops8g03399 8 73056871 73058878 Rops6g00952 6 22941205 22942937 PCT