Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g03368 ATGGCAGCTCGTACACTTTCTTGGTTACTCTCTCGCTCGTTTTCTGCTTCTTCTTCTGGAGCTGCTTCTTCTCTGCTTCGTTCACTAGGAAGAAAAACTGGAGGTTTGAGAAACATTAACAGATTCAGCACTGCTGCAGCAGTTGAGGGATTAATCTCTCCACAAGTTTCAATAAATTACACTCAGCATCTCATAAATGGACAATTCGTGAATGCTGCATCAGGGAAAACATTTCCAACTTATGACCCACGAACAGGGGAAGTGATTGCCCAAGTTGCTGAAGGTGATGTTGAAGATATCAACCGTGCTGTCTCAGCAGCTCGCAAGGCCTTTGATGAAGGACCATGGCCTAAAATGACTGCTTATGAAAGATGTCGGATATTGCTGCGCTTTGCTGATTTGGTTGAGAAGCACAATGATGAGCTTGCAGCTCTGGAGACATGGAACAATGGAAAGCCTTATGAACAGGCTGCTAAGGCTGAAGTACCAATGTTTGTGCGTTTATTTCACTATTATGCTGGTTGGGCGGATAAAATTCATGGGATGACCGTCCCAGCTGATGGAGATTATCACGTCCAGACATTGCATGAACCAATTGGCGTGGCAGGACAAATTATACCATGGAACTTTCCTCTACTTATCTTGAAACTAGTAGCACGTTTGACAAGCTTGGGACCGAGTTGA 684 0.4444 MAARTLSWLLSRSFSASSSGAASSLLRSLGRKTGGLRNINRFSTAAAVEGLISPQVSINYTQHLINGQFVNAASGKTFPTYDPRTGEVIAQVAEGDVEDINRAVSAARKAFDEGPWPKMTAYERCRILLRFADLVEKHNDELAALETWNNGKPYEQAAKAEVPMFVRLFHYYAGWADKIHGMTVPADGDYHVQTLHEPIGVAGQIIPWNFPLLILKLVARLTSLGPS* 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g03368 227 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 51 215 - -
Rops8g03368 227 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 52 221 IPR016162 GO:0016491
Rops8g03368 227 Pfam Aldehyde dehydrogenase family 70 215 IPR015590 GO:0016491
Rops8g03368 227 SUPERFAMILY ALDH-like 57 215 IPR016161 GO:0016491
Rops8g03368 227 FunFam Aldehyde dehydrogenase, mitochondrial 51 226 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g03368 Rops-Chr8 72520543 72522074 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g03368 1 215 Aldehyde Dehydrogenase Gene Family AT3G48000 71.560 4.80e-108 319
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g03368 K00128 - gmx:100811501 346.665