Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g03367 ATGGTGGCAGAGTTCACTAGTGGTTGGAGAGGAATGAAGAGTTTCAGCTACCATGTTCTCACTGGTCGTTGGTTCATGTTATTTGCCTCATTACTAATCATGGCTGTTGCTGGGGCAACCTATATGTTTGGTTTATACTCTAATGAGATCAAAACCTCTTTGGGTTATGACCAAACTACTCTCAACTTGCTTAGCTTCTTCAAAGACCTTGGTGCCAATGTTGGAATTATCTCTGGCTTAATCAATGAGGTTAGTCCACCCTGGGTGGTACTTGCAATTGGGGTCATTATGAACTTCTCTGGCTACTTCATGATATGGCTTTCTGTCACTCATCACATTCCCAAACCCAAAGTTTGGCAAATGTGTCTCTACATTTGCATTGGTGCAAATTCTCAAACTTTTGCCAACACTGGTGCTTTAGTCACATGTGTCAAGAACTTCCCAGAAAGCCGTGGCAGTGTTTTAGGCCTTCTCAAGGGTTATGTTGGTCTAAGTGGTGCCATAATCACACAGATCTACCATGCCCTTTATAGTGACAACACCCAAAGTCTTATCTTGCTCATTGCTTGGCTCCCTGCAGCTGTCTCCTTCTTTTTCCTTCCAACAATTCGGATATTGAAAACTGTACAAAATCCCAAGGAGAGCAAAGTTTTCTACAACCTTCTTTATATTTCACTTGGCCTAGCTGGTTTTCTCATGGTGTTGATCATTATCCAAAACAAGCTCAATTTTTCAAGGACTGCATACATTGCTGATGGCATTGTGGTTATTTTCTTACTTCTTATCCCACTTCTTGTGGTATTTAGAGAAGAATTCAAACTCTTGAAGGCCAAGATTCAAACCTCAACCGATCCATCCCAATTGAAAGTAGTCACTGAAGTTCCATCTCCAAATATAGCATTACCACAGCAAGAACCACAGGTAGTACCACCAGCTACCACAAGCTCACACAAGAAAAGCTCTTGTTTTGCCACTATGTTCAAACCCCCAAATAGGGGTGAAGACTACACCATTTTGCAAGCCCTGTTCAGTATTGACATGCTGATTCTGTTCTTAGCAACAACATTTGGTGTTGGTGGAACATTAACAGCCATTGATAATCTAGGACAAATTGGGAACTCATTAGGATACCCAAACAAAAGCATCACCACCTTTGTGTCCCTAGTGAGCATATGGAACTATCTTGGAAGAGCAGTAGCTGGTTATGCCTCTGAAATCTTCTTGACCAAATACAAATTCCCTCGTCCCTATATGCTAAGTTTAGTTATGCTTCTCTCTTGTGCTGGCCATATTCTTATTGCCCTCGGTGTCCCAAACTCTCTTTACTTCGCTTCAGTGATTATTGGTTTTAGTTTTGGAGCTCAGTGGCCATTAATGTTTGCAATCATATCAGAAATATTTGGCCTTAAATATTACTCCACGTTATACAATTTTGGAGCCGTGGCTAGCCCTGTTGGATCTTACATACTAAACGTGAGAGTCACTGGTTATTTGTATGATAAAGAGGCTTTGAAACAATTGGAGGCTAAGGGACTCACAAGAGAAGCAGGGAAGGACTTAACTTGTGTAGGAGTAAAATGCTACAGAATGGCTTTTATAATAATCACAGCTTCAACGCTGATTGGATGTTTTGTTTCTTTCATTTTGGTTCTAAGGACTAGAAAATTTTACCAAGGTGATATCTATAGAAAGTTCAGGGCAGAACTTGAAGCAGCAGAGACAGAGATGAGCACTGCCAAAACTGATACCGTTCTCTCTGAAACAGAAGGAAAAGCAACCTTAAGCACCACTGAAGCTACTACTCCTGCCACCACAAGCGGTTCACAGGAATCAGATAAAAACAATACAAAGTGA 1854 0.4105 MVAEFTSGWRGMKSFSYHVLTGRWFMLFASLLIMAVAGATYMFGLYSNEIKTSLGYDQTTLNLLSFFKDLGANVGIISGLINEVSPPWVVLAIGVIMNFSGYFMIWLSVTHHIPKPKVWQMCLYICIGANSQTFANTGALVTCVKNFPESRGSVLGLLKGYVGLSGAIITQIYHALYSDNTQSLILLIAWLPAAVSFFFLPTIRILKTVQNPKESKVFYNLLYISLGLAGFLMVLIIIQNKLNFSRTAYIADGIVVIFLLLIPLLVVFREEFKLLKAKIQTSTDPSQLKVVTEVPSPNIALPQQEPQVVPPATTSSHKKSSCFATMFKPPNRGEDYTILQALFSIDMLILFLATTFGVGGTLTAIDNLGQIGNSLGYPNKSITTFVSLVSIWNYLGRAVAGYASEIFLTKYKFPRPYMLSLVMLLSCAGHILIALGVPNSLYFASVIIGFSFGAQWPLMFAIISEIFGLKYYSTLYNFGAVASPVGSYILNVRVTGYLYDKEALKQLEAKGLTREAGKDLTCVGVKCYRMAFIIITASTLIGCFVSFILVLRTRKFYQGDIYRKFRAELEAAETEMSTAKTDTVLSETEGKATLSTTEATTPATTSGSQESDKNNTK* 618
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g03367 617 Pfam Nodulin-like 23 268 IPR010658 -
Rops8g03367 617 Coils Coil 562 582 - -
Rops8g03367 617 Gene3D MFS general substrate transporter like domains 324 557 IPR036259 -
Rops8g03367 617 MobiDBLite consensus disorder prediction 578 617 - -
Rops8g03367 617 FunFam Nodulin family protein 338 559 - -
Rops8g03367 617 SUPERFAMILY MFS general substrate transporter 23 557 IPR036259 -
Rops8g03367 617 CDD MFS_Mch1p_like 22 543 - -
Rops8g03367 617 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 24 563 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g03367 Rops-Chr8 72516216 72518175 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g03367 1 568 Nodulin-like Gene Family AT2G39210 66.373 0.0 773
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g03367 - - gmx:100818752 906.746