Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g03362 ATGCAGTTAGTATCTCCCACGATCAAGTCAAGATATTTATCACCCGGGAAAGTTTCAAATCCTTATGCAAACTCTGAAGCAAATATGTCATCTTTCAACAATCAAAAGAGGGACCAGGTTAGAGATCCTCAAACAGAAATCCCACATGCAAGAGAAATGAAGTTGGGTGAGCTATTGAAGAAGAAGGCAGAGGAAGGAGTGGCTGTGAGGGTTATGATTTGGGATGATGAAACATTTTTGCCTTTTATTAAGAATAAAGGTGTGATGAACACACATGATAAGGATGTTTTTGCTCACTTTAAACACACAAAAGTAATATGCAGAAAGTGTCCAAGATTACACCACAAGTTTCCCACACTTTTTGCTCACCATCAGAAGACCATAACTATGGACACCAAAGCACCTGACTCTGTTAATGATAGAGAAATTATAAGCTTTTTGGGTGGTGTAGATTTGTGTGATGGATGA 468 0.3846 MQLVSPTIKSRYLSPGKVSNPYANSEANMSSFNNQKRDQVRDPQTEIPHAREMKLGELLKKKAEEGVAVRVMIWDDETFLPFIKNKGVMNTHDKDVFAHFKHTKVICRKCPRLHHKFPTLFAHHQKTITMDTKAPDSVNDREIISFLGGVDLCDG* 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g03362 155 Gene3D Endonuclease Chain A 31 155 - -
Rops8g03362 155 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 119 155 IPR001736 GO:0003824
Rops8g03362 155 PANTHER PHOSPHOLIPASE D 41 155 IPR015679 -
Rops8g03362 155 SUPERFAMILY Phospholipase D/nuclease 54 154 - -
Rops8g03362 155 MobiDBLite consensus disorder prediction 15 46 - -
Rops8g03362 155 MobiDBLite consensus disorder prediction 15 38 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g03362 Rops-Chr8 72454527 72456325 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g03362 40 155 Phospholipase D Gene Family (Wang group) AT1G55180 65.812 1.21e-49 167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g03362 K01115 - gmx:100807431 210.69