Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g03361 ATGGCGAGTGCTTCTGAATCCTACGACTACGACGAGAACGAAATTGCAGCGGCACTTCTCTTCGGAGCCGGATCAGAAGAACATGGATTCACCGAAGAAAACAACGACGACGACGACGACGAAGAAGAAGAAGACGATGAAGCGCACGTCGCCGTTGTGCCTTCTTCACCTAGGGTTTCGCATGACGGTCCTCGAAGTCCTGCCTCTAATGAAGTAATCGTTATCCTCGATGAAGAGACGCAGAATTTCGTTGAAGAGGAAGGAAACAAACGCCGTAGAACCGAAGGAGGAGAAGCTTCGTGTTCATCCTCCGCAATTGGGAGCGCTAACGGCACTCAAGGTAACGGCGAAATTGACGGCCTCTTTTGCCCTATTTGTATGGACGTTTGGACCAATGATGGCGAACATCACATCTGTTGTCTTCCTTGTGGACACATATATGGTATGTCTTGCATCAAAAGATGGCTTCAACAAAAAAATCCGAGTAAGTGTCCTCAATGTAAAAAGAGATGCTCGTTGAAGGATGTGAGGAAACTCTATGCTTCCAGAGTACTCGCGGTGGATGAAGAATCTCACAGGAGAATTAAGTCACTTGAGGTCAAATGTGCTGCCCTTGAAAGTAAGGATGGTGATTGGTGCAAGAAAGAAGCTGGATGGCAGGAGAGGGAAGCTGCATTGCATCTCAAAGTTCATAACCTTACAGAGAGAAACACTTATTTGGAGCAGCTGCTACTAGACATGCAAAGCAGGCAATCTGGATGGATAGATGGCAATGTGAACTCTCAATGGAGATATGAATCTGAGCGCAAATGTGGTCCAAAGTTCCATGCAAAAGGATCTTTTTGCAATTTTGAATTTCAGAAAGCGTTTCATCTAGACGGTGCACGTGTGTTTGATATGGACACTTCTAATCAAATTTTATTAATTGCACAAAAGCCAAAAGTGATAGGTGGAGTGCACTTGCTAACTAAAATGAGCTTGATATCTCCATTTGAGATGGAAGATATCTTACTTCCTTCCACTACAAGTTGTATTAGAGACCTACATATTTCTCCTTCTAATAGTAGACTGGCTCTTTACGCTTCATTAGGGAAGAAATTATCAGTGCTCAGCTTGGACAGTAACAACCTTGTTGTCAATTATGATCTACAGGATCCTGCTTGGTCGTGCTCATGGGATCTCAACAGTACACATTATATATATGCCGGACTACAGAATGGTTCTATGTTGGTGTTTGATATGCGCCAAACTGCAGGACCCGTAAAATCATTAGTTGGGCTGACTAGCAACCCTATCCATACTGTACAATCTCTTGCACAAACTTCAAGTCTTTCTTCTGGTGATAGAACCATCCTATCTGCATCTGCCGTTGGCCTTTGTCAGTGGAACATTGATTCTGAAGAACGGCCATTTATGGTTCCTGAATCTGATAATCAAGGAGTGTGTATATCCCTTGCGTATTGCCCAAGCAGTGATGACATTGTTGTTTCTTACCGTCCGAAGTTTGACATGTCAATGGACGTGCCTCTTTCTCAAGCATCTCCTACTCCTTCTCAAGTTACTGGACAAGGAGTACAGGGCTCTCATGTCTTGTTCAAGAGAATGGGCAGTCATAATTTCCAAAAGACGGGTTCCTCATATGCAAATGTAAGTAAAATTCTGCTCCCAAAAAGTTTGATTATAGACAGAGAGAATCAGAGTAGATTATTTGCATGTGGAGATGAAGTTACATGTGATTTGGTCTTGCACGAGTTGCCATCTTTTAGAGTTCTTCAGCAATTCAAAATGCCAGCTCAGGCCCGTGATGTTAGGTACTCACCTAGCCATGGAATACTTGGTTGTTTAAGTGAGAACACATTGCAACTTTTCCATACCAATCTGTCATATGGAAGGTAG 1896 0.4325 MASASESYDYDENEIAAALLFGAGSEEHGFTEENNDDDDDEEEEDDEAHVAVVPSSPRVSHDGPRSPASNEVIVILDEETQNFVEEEGNKRRRTEGGEASCSSSAIGSANGTQGNGEIDGLFCPICMDVWTNDGEHHICCLPCGHIYGMSCIKRWLQQKNPSKCPQCKKRCSLKDVRKLYASRVLAVDEESHRRIKSLEVKCAALESKDGDWCKKEAGWQEREAALHLKVHNLTERNTYLEQLLLDMQSRQSGWIDGNVNSQWRYESERKCGPKFHAKGSFCNFEFQKAFHLDGARVFDMDTSNQILLIAQKPKVIGGVHLLTKMSLISPFEMEDILLPSTTSCIRDLHISPSNSRLALYASLGKKLSVLSLDSNNLVVNYDLQDPAWSCSWDLNSTHYIYAGLQNGSMLVFDMRQTAGPVKSLVGLTSNPIHTVQSLAQTSSLSSGDRTILSASAVGLCQWNIDSEERPFMVPESDNQGVCISLAYCPSSDDIVVSYRPKFDMSMDVPLSQASPTPSQVTGQGVQGSHVLFKRMGSHNFQKTGSSYANVSKILLPKSLIIDRENQSRLFACGDEVTCDLVLHELPSFRVLQQFKMPAQARDVRYSPSHGILGCLSENTLQLFHTNLSYGR* 632
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g03361 631 PANTHER RFWD3 PROTEIN 31 626 IPR037381 GO:0004842|GO:0005634|GO:0016567|GO:0036297
Rops8g03361 631 SMART ring_2 123 167 IPR001841 -
Rops8g03361 631 SUPERFAMILY WD40 repeat-like 334 596 IPR036322 GO:0005515
Rops8g03361 631 CDD mRING-C3HGC3_RFWD3 119 180 - -
Rops8g03361 631 MobiDBLite consensus disorder prediction 18 109 - -
Rops8g03361 631 ProSiteProfiles Zinc finger RING-type profile. 123 168 IPR001841 -
Rops8g03361 631 MobiDBLite consensus disorder prediction 83 97 - -
Rops8g03361 631 SUPERFAMILY RING/U-box 118 174 - -
Rops8g03361 631 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 106 233 IPR013083 -
Rops8g03361 631 Gene3D - 294 506 IPR015943 GO:0005515
Rops8g03361 631 MobiDBLite consensus disorder prediction 31 48 - -
Rops8g03361 631 Pfam Ring finger domain 123 168 IPR001841 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g03361 122 173 C3H Transcription Factor Family AT1G51930 41.509 7.05e-07 47.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g03361 K15691 - gmx:100818898 764.607