Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g03354 ATGAGAACCCAACGGCTTCACCATCTCCTCCTCTTCTTCATAGCCGCATTCTCCATTTTCCACCCCGCACCCACCGCCGGCGAAGCTGAATTCATCCGCACCAGTTGCAACACCACACTCTACCCTGACATCTGCTACACCTCCCTTTCTCGTTACGCCAATGCCGTCCAACAAAACCCTGGCCAACTCGCTCGCGTCGCCATAGCCGTGAGTCTCTCGAAGGTTCACCACACCGCCTCCTACCTCTCCAACCTCACGCGCGACGCCGATTACGGCGGAAGCTCTCGCGCCGCTCTGGCACTCCACGACTGCTTCTCAAACCTCGACGATGCCGTCGATGAAATCCGCGGCTCACTGAAACAGATGCGGCAAATAGGTGCCGCCGGCGCCGGTTCCGGTTCGTTCCTTTTCCAAATGAGTAACGTGCAAACATGGATGAGTGCCGCGCTCACCGATGAGGAGACTTGTACGGATGGATTCCAGGATGTACCGGAGTGTCCGATGAAAACGGATGTATCTGATCGTGTCACGAAGGTGAAGAAGTTCACAAGCAATGCTTTAGCGCTTGTGAATAGCTATGCCAACAAAGGAATGCGTTGA 600 0.5533 MRTQRLHHLLLFFIAAFSIFHPAPTAGEAEFIRTSCNTTLYPDICYTSLSRYANAVQQNPGQLARVAIAVSLSKVHHTASYLSNLTRDADYGGSSRAALALHDCFSNLDDAVDEIRGSLKQMRQIGAAGAGSGSFLFQMSNVQTWMSAALTDEETCTDGFQDVPECPMKTDVSDRVTKVKKFTSNALALVNSYANKGMR* 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g03354 199 Gene3D Invertase/pectin methylesterase inhibitor family protein 27 193 IPR035513 -
Rops8g03354 199 FunFam Pectin methylesterase inhibitor 1 27 193 - -
Rops8g03354 199 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 30 193 IPR035513 -
Rops8g03354 199 Pfam Plant invertase/pectin methylesterase inhibitor 31 189 IPR006501 GO:0004857
Rops8g03354 199 CDD PMEI-like_3 34 195 - -
Rops8g03354 199 PANTHER PECTINESTERASE INHIBITOR-LIKE 9 189 - -
Rops8g03354 199 SMART PMEI_2 27 189 IPR006501 GO:0004857
Rops8g03354 199 NCBIfam pectinesterase inhibitor domain 9 193 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g03354 Rops-Chr8 72329362 72329961 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g03354 32 192 Carbohydrate Esterase AT3G14310 22.840 3.35e-12 62.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g03354 - - gmx:100812251 312.383