Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g03343 ATGGGTAAAACAAGTAGTTCTAGGGGAATATTGTGGAAGGGAGGCTTTAGAGTATTGGTGCCTATCATGAGGAAACTGCAGACCACTTTCTCACGTCCAAAAGGGGTGAAGCAGGGCCATTTTGTGGTGATTGCAACTGAAGGCTGGAAACCAGAGAGATTCTTTATTGAATTGGGATATTTGGATCACCCTGATTTTGTGAAGTTGTTAAAGCAGGCTGAAGAAGAGTTTGGGTTCTCTCAAGTGGGAGCACTTGCAATTCCTTGTGAACCAGATGACTTGAAGAGAATCATTGGAAGGAAAAAGCAAATAAACAAGGGTATTACCTGTTAG 333 0.4234 MGKTSSSRGILWKGGFRVLVPIMRKLQTTFSRPKGVKQGHFVVIATEGWKPERFFIELGYLDHPDFVKLLKQAEEEFGFSQVGALAIPCEPDDLKRIIGRKKQINKGITC* 111
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g03343 110 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 28 96 IPR003676 GO:0009733
Rops8g03343 110 Pfam Auxin responsive protein 31 98 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g03343 Rops-Chr8 72147389 72147721 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g03343 36 99 Calmodulin-binding Proteins AT4G34750 42.188 8.22e-12 56.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g03343 K14488 - gmx:100795119 177.178