Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g03342 ATGGATATTAGAAGGAAGATGCTCAAGCATTTGATCGCAAAGGTGTTGAGGGGTCTTCAATTCTTGGCACTTAGTAGACCATATTCGAGAATAGCTTATTTGAGTGACATTGATGATGAGAATGAAACCGCAACAACGGTGCCAGAAGATGTTAGAGAGGGACATTTTGTGGTTATAGCAATGCAGGGTGAAGAAACCAAGAGGTTCATTGTTGAGTTAGATTATTTAACTGATCCTGCGTTTTTGAAACTGCTGGAGCAAGCTGGGGAAGAGTATGGTTTTGATCAGAAGGGTGCTCTGGTTGTCCCCTGCAACCCCCAAGAACTTCAGAAGATTATAGAGAATCGAAGGGTGGACAGTGCCACTACCTAA 372 0.4301 MDIRRKMLKHLIAKVLRGLQFLALSRPYSRIAYLSDIDDENETATTVPEDVREGHFVVIAMQGEETKRFIVELDYLTDPAFLKLLEQAGEEYGFDQKGALVVPCNPQELQKIIENRRVDSATT* 124
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g03342 123 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 32 112 IPR003676 GO:0009733
Rops8g03342 123 Pfam Auxin responsive protein 36 113 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g03342 Rops-Chr8 72122729 72123100 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g03342 30 122 Calmodulin-binding Proteins AT3G43120 38.384 4.53e-14 63.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g03342 - K14488 gmx:102661602 164.851