Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g03330 ATGAAGAACAATGGCAATGCCTTGTTGGTCTCTCTGGTTTTATCCTTGTCCATTCTCGGGGTTCAATGTGCGAATGGTGGTGATTCTTTTGCACCCTCTTTTTACACTGAAGAAATCTACAAGGAGCTTGAAGGTCTTACCAGGGCTTTAACCAGCGACATCAAGCGAGATTTAAACTTCTGTATCAAGGATGTGCATAAAGACTGGGAGGAAGCCTTTGATTTTAAGGGAAAGTTGGATTTCGTGGATGCTTGTGTTAAGCAAAAAGGTGATTTCAGAGATAGAATGTGTACCACTGCTGAAATAAGGTTCTACTTCCAGAGTTTCTTCAGACAGGGTGGCTCATCCGGTTACCTAAAACCTAACAAAAATTGCAATTTGACTTCATGGGTTTCTGGTTGTGAACCTGGTTGGAGTTGTAAAGCGGACCAGAATATTGACCTCAAAAAGGATACAAAGGATATTCCTTCTAGAATTAATGACTGTCAACCTTGTTGTGAGGGGTTTTTCTGCCCTCAAGGATTGACTTGCATGATAACTTGCCCACTTGGTTCTTATTGCCCACTTGCAAAACTAAATCAAACAACTGGAGTATGTGAGCCATATAGTTACCAAATTCCTGCAGGAGAAACAAATCATACTTGTGGTAGTGCTGATATTTGGTCTGGTGTTGTGAACAATAGTGACATCTTCTGTTCTCCAGGATCATACTGCCCATCTCCGACACACAAAGTTTCTTGTGATAGTGGATATTACTGCAGGAAGGGTTCTACTCATCAAAATCCATGCTCCAAGTTGAGTAGCTGTAATCCAAACACAGCAACCCAAAATATGCATGTATACGGAGCTTTGCTTATTGTATCTTTGAGTGCCCTTCTGGTCTTCATTTATAACTGTTCTGATCAAGTTCTAGTTACTCGAGAAAGAAGGAAGGCTAAAACCAGGGAAGCTGCAGCAAAACATGTAAGAGAAACTGTACAAGCTCGTGAAAAGTGGAAAATGGCAAAAGATGTTGCTAAGAAGCACACAATGGGGTTGCAACAGCAATTGTCTCGCACCTTTTCTCGTAGAAAATCGGCAAGGCATTCAGATCAATTGCCACCAATGCCTCCAGATTCATCAAGCAAACCTGAGCAGTCATCTACAGGTTCTAAAGCAAAAAAGAATGAGCCTGGCAACCTTACTAAAATGTTACACTCTCTTGAGAATGATCCTGACAGCCAAGAAGGATTTGATCTTCAGATTGGAGATAAAAACATTAGAAAGCAGATGCCAAAGGGAAAAAAGTTACATACACATAGCCAAATTTTAAGGTATGCTTATGGTCAGATTGAGAAGGAGAAAGCTCAGCAAGAGAAAAACAAGAACTTGACTTTCTCAGGAGTAATTTCAATGGCTACTGAAGGTGAGGTGAGGACAAGGCCCGTGATTGAGGTAGCTTTCAAAGATCTAACTCTCACCTTGAAAGGGAAAAATAAACATCTATTGAGGTGTGTGACTGGTAAAATCATGCCTGGTAGAGTTTCAGCTGTCATGGGCCCCTCAGGAGCTGGAAAAACAACATTTCTTTCAGCTTTGGCAGGAAAAGCAAGAGGATGCACTATGACAGGCTCAATTCTAGTTAATGGAAAACCTGAATCCATTCATTCATATAAGAAAATTACTGGTTTTGTGCCACAAGATGACATTGTGCATGGGAACTTGACAGTGGAGGAAAATCTTCGTTTCAGTGCAAGATGCAGACTCCCTGCGGACATGCCAAAACCAGATAAGGTTCTGATTGTTGAAAGAGTGATTGAATCCTTGGGACTCCAGCCAGTGAGGGATTCTCTAGTTGGAACTGTAGAGAGAAGGGGCATATCTGGAGGGCAAAGAAAACGTGTAAATGTAGGGTTGGAGATGGTGATGGAGCCTTCATTATTAATCTTAGATGAGCCTACAACTGGTTTGGACAGTGCATCTTCCAGTTTATTGCTTAGAGCACTTAGACGTGAAGCTCTTGAAGGGGTAAACATCTGCATGGTACTTCACCAACCAAGCTATACTTTGTTCAGAATGTTTGATGATATAATATTTCTAGCCAAAGGTGGCCTTACTGCATATCATGGTCCTGTTAAAAAAGTAGAAGAATACTTTGCTGGCATTGGAATACCTGTACCTGATCGTGTGAATCCTCCAGATCATTTCATTGACATTCTGGAAGGTTTAGTGAAACCAAGTTCAGGTGTAACTCATGAAACACTTCCTGTGAGATGGATGCTTCATAATGGATATCCAGTACCTCCTGATATGCTTCATTTAGCTGATCAAATTGCTACATCTTCATCTGCCTCAAAAGAAACTGATGCAACAAAGGCTACTGAGGAAGCTTCTTCTGATCAATCCTTTGTTGGAGAGTTTTGGGAGGATATGAAGAGTAATGTTCGGATCCAACGAGATCACATAGAGGCAATCTTCTCAAGAACAAAGGACTTATCTAACCGAACAACTCCTGGTGTAGCCCGGCAATATAGATACTTTGTTGGGCGTGTTGGCAAGCAGCAGCTGCGAGAAGCAAAATTACAAGCAGTCGACTATCTCCTTTTATTGGTTGCTGGTGCTATCTTAGGAACTCTTACCAAAATGAATGATGAAACATTTGGGTCCCTTGGCTATACATATACTGTCATTGCTGTCTCTCTACTTTGCAAGATTGCTGCTCTCAGATCATTTTCTCAGGATAAATTACAATACTGGAGGGAGAGTGCAGCTGGTATCAGTAGTCTGGCCCATTTTCTTTCCAAAGATACAATTGATCTTTTCAATACAATCATCAAACCTTTGGTTTATCTGTCCATGTTCTACTTTTTTAGCAACCCAAGGTCAAGCTTTATGAGTAATTATATAATTTTGCTGAGTCTGGTGTACTGTGTGACTGGAATGGCTTATGCATTAGCCATTTACTTTGAGCCTAGTCCTGCGCAGCTGTGGTCAGTGCTTCTTCCTGTTGTGATGACTCTCATTGCGAACCAGAACAGAGATACTACGCTTATGAAGGTCCTTGTGCAATTCTGCTACCCCAAATGGGCTTTGGAGGCCTTTATCGTTGCAAATGCTGAAAGGTACACTGGGGTGTGGCTGATAACTCGTTGTGGTTCATTGATGACCAGTGGTTATGATGTTAGTGAATGGCCTATTTGTCTGATTGCCCTCTTTTTGTATGGTATAGCTGCCCGAGTTGTGGCCTTCATTTGTCTAGTGATTTCCCAAAAGAAGTGA 3258 0.415 MKNNGNALLVSLVLSLSILGVQCANGGDSFAPSFYTEEIYKELEGLTRALTSDIKRDLNFCIKDVHKDWEEAFDFKGKLDFVDACVKQKGDFRDRMCTTAEIRFYFQSFFRQGGSSGYLKPNKNCNLTSWVSGCEPGWSCKADQNIDLKKDTKDIPSRINDCQPCCEGFFCPQGLTCMITCPLGSYCPLAKLNQTTGVCEPYSYQIPAGETNHTCGSADIWSGVVNNSDIFCSPGSYCPSPTHKVSCDSGYYCRKGSTHQNPCSKLSSCNPNTATQNMHVYGALLIVSLSALLVFIYNCSDQVLVTRERRKAKTREAAAKHVRETVQAREKWKMAKDVAKKHTMGLQQQLSRTFSRRKSARHSDQLPPMPPDSSSKPEQSSTGSKAKKNEPGNLTKMLHSLENDPDSQEGFDLQIGDKNIRKQMPKGKKLHTHSQILRYAYGQIEKEKAQQEKNKNLTFSGVISMATEGEVRTRPVIEVAFKDLTLTLKGKNKHLLRCVTGKIMPGRVSAVMGPSGAGKTTFLSALAGKARGCTMTGSILVNGKPESIHSYKKITGFVPQDDIVHGNLTVEENLRFSARCRLPADMPKPDKVLIVERVIESLGLQPVRDSLVGTVERRGISGGQRKRVNVGLEMVMEPSLLILDEPTTGLDSASSSLLLRALRREALEGVNICMVLHQPSYTLFRMFDDIIFLAKGGLTAYHGPVKKVEEYFAGIGIPVPDRVNPPDHFIDILEGLVKPSSGVTHETLPVRWMLHNGYPVPPDMLHLADQIATSSSASKETDATKATEEASSDQSFVGEFWEDMKSNVRIQRDHIEAIFSRTKDLSNRTTPGVARQYRYFVGRVGKQQLREAKLQAVDYLLLLVAGAILGTLTKMNDETFGSLGYTYTVIAVSLLCKIAALRSFSQDKLQYWRESAAGISSLAHFLSKDTIDLFNTIIKPLVYLSMFYFFSNPRSSFMSNYIILLSLVYCVTGMAYALAIYFEPSPAQLWSVLLPVVMTLIANQNRDTTLMKVLVQFCYPKWALEAFIVANAERYTGVWLITRCGSLMTSGYDVSEWPICLIALFLYGIAARVVAFICLVISQKK* 1086
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g03330 1085 Gene3D - 469 714 IPR027417 -
Rops8g03330 1085 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 438 1047 - -
Rops8g03330 1085 MobiDBLite consensus disorder prediction 375 389 - -
Rops8g03330 1085 CDD ABCG_EPDR 477 703 - -
Rops8g03330 1085 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 479 720 IPR003439 GO:0005524
Rops8g03330 1085 Pfam ABC-2 type transporter 677 1085 IPR043926 GO:0140359
Rops8g03330 1085 Pfam ABC transporter 499 647 IPR003439 GO:0005524
Rops8g03330 1085 ProSitePatterns ABC transporters family signature. 620 634 IPR017871 GO:0005524|GO:0016887
Rops8g03330 1085 FunFam ABC transporter G family member 24 473 715 - -
Rops8g03330 1085 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 479 702 IPR027417 -
Rops8g03330 1085 SMART AAA_5 505 697 IPR003593 GO:0016887
Rops8g03330 1085 MobiDBLite consensus disorder prediction 330 410 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g03330 Rops-Chr8 71995915 72003043 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g03330 506 699 Calmodulin-binding Proteins AT2G36910 27.723 1.34e-08 57.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g03330 - - lang:109333797 1795.02