Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g03328 ATGAAGGGAAAGATTGTGAGAGGGTGTCTTAACAAGTGGAAGAAAATGAGGAGTCGAGTGATACCTTGTGCTTCCTGCTGTAGATGGGGTCTGTGGTCTTCCAAGCATGAAAGGGACTCCATCCCAAATGATGTCCCAAAGGGTCACTTGGTTGTCTACGTTGGAGAGAACCAAAAGAGATTTGTCATCAAGATTACATTACTCAATCATCCACTCTTCAAGGTCTTGCTGGATCAAGCTCAGGAAGAATATGATTTCATTGCAGATTCAAAACTCTGTATTCCTTGTAATGAACATCATTTCCTCAGTGTCCTTAGTTGTGCAAGCTTTCCACAGAACTACAGGGTGTTTGTGTGTGTCTGA 363 0.427 MKGKIVRGCLNKWKKMRSRVIPCASCCRWGLWSSKHERDSIPNDVPKGHLVVYVGENQKRFVIKITLLNHPLFKVLLDQAQEEYDFIADSKLCIPCNEHHFLSVLSCASFPQNYRVFVCV* 121
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g03328 120 Pfam Auxin responsive protein 12 107 IPR003676 GO:0009733
Rops8g03328 120 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 25 103 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g03328 Rops-Chr8 71985093 71985455 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g03328 43 106 Calmodulin-binding Proteins AT4G34750 46.875 8.82e-18 72.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g03328 K14488 - jre:109013770 182.956
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops8g03328 8 71985093 71985455 Rops8g03328 8 71985093 71985455 ECH