Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g03314 ATGGAAGCAACCAACGTGAGCAATGGCTACCACCAGAGCCAAAACGGGTCCTTGTGCTTGAAGAGCAATACTAGCAGCGACCCATTGAATTGGGGAGTGGCGGCGGAGTCAATGAAGGGGAGCCACTTGGATGAGGTGAAGCGCATGGTGGAGGAGTACCGGAATCCCGTGGTCCGGATTGGCGGCGAGACGCTGACGATCTCGCAGGTGGCTGCCATTGCCACACGTGACCAAGACGTGAGTTTGGAGCTGTCGGAATCTGCTAGGGCTGGTGTTAAGGCAAGCAGTGACTGGGTGATGAATAGCATGAACAATGGCACTGACAGTTACGGTGTCACCACCGGCTTCGGTGCCACCTCTCACCGTAGAACCAAACAAGGTGGTGCTTTGCAGAAAGAGCTCATCAGGTTCTTGAACGCTGGAATATTTGGCAATGGTACCGAGTCATGTCACACACTGCCACACTCTGCAACTAGAGCAGCTATGCTTGTGAGAATCAACACTCTTCTCCAAGGATACTCAGGCATTAGATTTGAAATCCTAGAAGCCATCACCAAGCTCCTTAACAACAACATTACCCCATGTTTACCACTTCGTGGTACAATCACAGCTTCTGGGGATCTGGTCCCTCTTTCTTACATTGCTGGTTTGCTTACTGGCCGACCAAACTCAAAGGCTATGGGACCCTCTGGAGAGGTACTTAATGCCAAGGAAGCTTTCCAATTGGCTGGCATCAACTCTGAGTTCTTTGAATTACAGCCGAAGGAAGGCCTTGCACTTGTTAATGGCACTGCTGTTGGTTCTGGCTTAGCTTCTATTGTTCTCTTTGAGGCAAATATACTAGCTGTGTTGTCTGAAGTTCTATCCGCTATTTTTGCTGAAGTGATGCAAGGGAAACCTGAATTCACTGACCATTTGACACATAAGCTAAAGCACCACCCTGGCCAAATTGAGGCTGCTGCTATTATGGAGCACATTCTGGATGGAAGTTCGTACATGAAAGCTGCCAAGAAGTTGCATGAGATGGATCCCTTGCAAAAGCCAAAACAAGATCGATATGCCCTTAGAACTTCACCACAATGGCTTGGTCCTCTGATTGAAGTGATTAGATTCTCAACCAAGTCAATTGAGAGAGAGATTAACTCTGTGAATGACAACCCTTTGATTGATGTTTCCAGGAACAAGGCCTTGCATGGTGGTAATTTCCAAGGAACCCCTATTGGAGTCTCTATGGACAACACACGTTTGGCTCTTGCATCAATTGGCAAACTCATGTTTGCTCAATTCTCAGAGCTTGTCAATGATTTTTACAACAATGGGTTGCCTTCTAATCTCTCTGCTAGTAGAAATCCCAGCTTGGATTATGGTTTCAAGGGAGCTGAAATAGCCATGGCATCTTATTGCTCTGAACTCCAATATCTTGCCAATCCAGTCACAACCCATGTCCAAAGTGCTGAGCAGCACAACCAAGATGTGAACTCTTTGGGTTTGATTTCTTCTAGAAAAACAAACGAAGCCATCGAGATCCTTAAGCTCATGTCTTCCACTTTCTTGATTGCACTTTGCCAAGCAATTGACTTAAGGCATTTGGAGGAGAACTTGAAAAGCTCGGCCAAGAACACTGTAAGCCAAGTTGCCAAGAGGACTCTTACCACAGGTGTCAATGGAGAACTCCACCCTTCCAGATTTTGTGAAAAAGATTTGCTGAAAGTTGTAGATAGGGAGCATGTGTTTGCCTATATTGATGATCCCTGCAGTGCTACATACCCATTGATGCAAAAACTCAGGCAAGTGCTCGTGGATCATGCATTAGTTAATGGAGAAAATGAGAAGAACTTGAACACGTCAATCTTTCAAAAGATTGCAACTTTTGAGGAGGAGTTGAAGGCTCTCTTGCCAAAGGAGGTAGAAAGTGCAAGGGCTGCATATGAGAGTGGCAATCCAGCAATTCCAAACAAGATCAATGAATGCAGATCTTACCCATTGTACAAGTTTGTGAGAGAGGAGTTGGGGACAGGGTTGCTAACTGGAGAAAAGGTCAGGTCTCCAGGTGAGGAGTTTGACAAACTGTTCACAGCAATGTGTCAGGGTAAAATTATTGATCCTCTTCTGGAATGCCTTGGGGAGTGGAATGGTGCTCCTCTTCCAATTTGTTAA 2157 0.4599 MEATNVSNGYHQSQNGSLCLKSNTSSDPLNWGVAAESMKGSHLDEVKRMVEEYRNPVVRIGGETLTISQVAAIATRDQDVSLELSESARAGVKASSDWVMNSMNNGTDSYGVTTGFGATSHRRTKQGGALQKELIRFLNAGIFGNGTESCHTLPHSATRAAMLVRINTLLQGYSGIRFEILEAITKLLNNNITPCLPLRGTITASGDLVPLSYIAGLLTGRPNSKAMGPSGEVLNAKEAFQLAGINSEFFELQPKEGLALVNGTAVGSGLASIVLFEANILAVLSEVLSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYMKAAKKLHEMDPLQKPKQDRYALRTSPQWLGPLIEVIRFSTKSIEREINSVNDNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLALASIGKLMFAQFSELVNDFYNNGLPSNLSASRNPSLDYGFKGAEIAMASYCSELQYLANPVTTHVQSAEQHNQDVNSLGLISSRKTNEAIEILKLMSSTFLIALCQAIDLRHLEENLKSSAKNTVSQVAKRTLTTGVNGELHPSRFCEKDLLKVVDREHVFAYIDDPCSATYPLMQKLRQVLVDHALVNGENEKNLNTSIFQKIATFEEELKALLPKEVESARAAYESGNPAIPNKINECRSYPLYKFVREELGTGLLTGEKVRSPGEEFDKLFTAMCQGKIIDPLLECLGEWNGAPLPIC* 719
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g03314 718 FunFam Phenylalanine ammonia-lyase 531 652 - -
Rops8g03314 718 SUPERFAMILY L-aspartase-like 27 718 IPR008948 GO:0003824
Rops8g03314 718 CDD PAL-HAL 63 528 IPR001106 -
Rops8g03314 718 Gene3D - 531 652 IPR023144 -
Rops8g03314 718 PANTHER HISTIDINE AMMONIA-LYASE 22 718 IPR001106 -
Rops8g03314 718 NCBIfam phenylalanine ammonia-lyase 27 707 IPR005922 GO:0005737|GO:0006559|GO:0016841
Rops8g03314 718 MobiDBLite consensus disorder prediction 1 21 - -
Rops8g03314 718 FunFam Phenylalanine ammonia-lyase 265 575 - -
Rops8g03314 718 Pfam Aromatic amino acid lyase 65 539 IPR001106 -
Rops8g03314 718 Gene3D - 19 264 IPR024083 -
Rops8g03314 718 ProSitePatterns Phenylalanine and histidine ammonia-lyases signature. 200 216 IPR022313 GO:0016841
Rops8g03314 718 Gene3D Fumarase/aspartase (Central domain) 265 713 - -
Rops8g03314 718 FunFam Phenylalanine ammonia-lyase 18 264 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g03314 Rops-Chr8 71885487 71902693 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g03314 8 718 Monolignol Biosynthesis Gene Families AT2G37040 82.687 0.0 1259
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g03314 K10775 - gmx:100811101 1313.13