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Gene search
Sequence information
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Gene
Cds
Cds_length
GC_content
Pep
Pep_length
Rops8g03305
ATGACAAAAGACATCGAAACTGCAGCTCAAGGTAGTTTACCCCACAAGGACTACCATGACCCACCACCTGCGCCACTCTTTGACGCCGCCGAGCTACGCAAGTGGTCCTTTTACAGAGCCCTCATCGCCGAGTTCGTCGCCACTTTGCTCTTCCTTTACGTCTCCGTTTTGACCGTCATTGGCTACAACAGCCAAACGGATCCCGCTCACAACCCCACCGGCGACGCTGCTTGTAACGGCGTTGGCATTCTCGGAATCGCTTGGGCTTTCGGCGGCATGATTTTTGTCCTTGTTTACTGCACCGCCGGCATATCTGGGGGTCATATAAATCCGGCGGTGACGTTTGGGTTGTTCCTGGGGAGGAAGGTGTCGTTGATTAGAGCTATATTGTACATGGTGGCTCAGTGTTTGGGGGCCATAAGTGGTGTTGGGTTGGTGAAGGCTTTTCAGAAGAGTTACTATAACAGGTACAAAGGTGGTGCCAACATGTTATCTGATGGTTACAGCAAAGGAACTGGCTTGGGAGCTGAGATTATTGGCACCTTTGTTCTTGTCTACACAGTCTTCTCTGCCACCGATCCCAAGAGAAACGCCAGAGATTCCTTTGTTCCCGTTTTGGCACCGCTTCCAATTGGGTTTGCAGTGTTCATGGTCCACCTAGCCACCATCCCTATCACCGGAACAGGTATCAACCCTGCTAGAAGCTTCGGTGCTGCTGTTATATACAACAATGAGAAAGCATGGGATGACCAGTGGATTTTCTGGGTTGGACCCTTTATTGGTGCCGCCATTGCTGCAATTTACCACCAGTACGTGTTGAGAGCTCAAGCAGCGAAGGCTTTGGGTTCTTTCAGGAGCTCCTCAAACCTTTAA
873
0.5074
MTKDIETAAQGSLPHKDYHDPPPAPLFDAAELRKWSFYRALIAEFVATLLFLYVSVLTVIGYNSQTDPAHNPTGDAACNGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLGRKVSLIRAILYMVAQCLGAISGVGLVKAFQKSYYNRYKGGANMLSDGYSKGTGLGAEIIGTFVLVYTVFSATDPKRNARDSFVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNEKAWDDQWIFWVGPFIGAAIAAIYHQYVLRAQAAKALGSFRSSSNL*
291
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Annotation information
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Seq ID
Length
Analysis
Description
Start
End
IPR
GO
Rops8g03305
290
PRINTS
Major intrinsic protein family signature
176
194
IPR000425
GO:0015267|GO:0016020|GO:0055085
Rops8g03305
290
PRINTS
Major intrinsic protein family signature
252
272
IPR000425
GO:0015267|GO:0016020|GO:0055085
Rops8g03305
290
PRINTS
Major intrinsic protein family signature
212
234
IPR000425
GO:0015267|GO:0016020|GO:0055085
Rops8g03305
290
PRINTS
Major intrinsic protein family signature
127
146
IPR000425
GO:0015267|GO:0016020|GO:0055085
Rops8g03305
290
PRINTS
Major intrinsic protein family signature
39
58
IPR000425
GO:0015267|GO:0016020|GO:0055085
Rops8g03305
290
PRINTS
Major intrinsic protein family signature
90
114
IPR000425
GO:0015267|GO:0016020|GO:0055085
Rops8g03305
290
FunFam
Probable aquaporin PIP1-2
24
288
-
-
Rops8g03305
290
PANTHER
AQUAPORIN OR AQUAGLYCEROPORIN RELATED
4
284
IPR034294
-
Rops8g03305
290
ProSitePatterns
MIP family signature.
108
116
IPR022357
-
Rops8g03305
290
Pfam
Major intrinsic protein
31
269
IPR000425
GO:0015267|GO:0016020|GO:0055085
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Duplication type information
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Gene
Chromosome
Start
End
Duplicated_type
Rops8g03305
Rops-Chr8
71657242
71658760
Wgd
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Functional genes information
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Gene
Gene_start
Gene_end
Function
Ath_gene
Identity(%)
E-value
Score
Rops8g03305
1
286
Major Intrinsic Protein MIP
AT5G60660
80.420
1.18e-167
464
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Pathway information
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Query
KO
Definition
Second KO
KEGG Genes ID
GHOSTX Score
Rops8g03305
K09872
-
gmx:100807883
502.671
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Event-related genes
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Gene_1
Chr_1
Start_1
End_1
Gene_2
Chr_2
Start_2
End_2
Event_name
Rops8g03305
8
71657242
71658760
Rops6g02444
6
44651960
44654963
ECH
Rops8g03305
8
71657242
71658760
Rops8g03305
8
71657242
71658760
ECH
Rops6g00979
6
23658424
23659313
Rops8g03305
8
71657242
71658760
ECH
Rops8g03305
8
71657242
71658760
Rops7g00684
7
9031762
9033547
ECH
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