Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g03304 ATGAAGCGAAGGCGCCACGCGTGCTATTGCGGTTTTGGATTTTCATTCAACAGAGTATTGATCAGAAGCGGTCCTCCAGTTCTCGTTAGACAGCGAGCTAGTCAAGTTTTCCAGATCTTCCGCTTCCTCTTCTCTCTCTCCGGTTTTCTTTGCGATAGAATGGCATCCAACAGGGGTCAAGGTGGAATTCAACAGTTGTTGGCTGCTGAACAAGAAGCACAACGGATCGTGAATGCTGCGAAAAATGAAAAATTGGCTAGGCTGAAACAGGCCAAAGAAGAGGCTGAAAAAGAGGTTGCTGAATATCGAGCTCATTTGGAATCAGAGTTTCAAAAGAAAGTGTCAGCGAGTAGTGGAGATTCTGGTGCTAATGTCAAGCGACTTGAGCAAGAGACTGATGCAAAGATCCATCACCTGAAAACTGAGGCTGGGAGAATATCAGGGGATGTTGTCACTATGCTCCTCAAGTATGTAACTACAGTGAAGAATTAG 492 0.4533 MKRRRHACYCGFGFSFNRVLIRSGPPVLVRQRASQVFQIFRFLFSLSGFLCDRMASNRGQGGIQQLLAAEQEAQRIVNAAKNEKLARLKQAKEEAEKEVAEYRAHLESEFQKKVSASSGDSGANVKRLEQETDAKIHHLKTEAGRISGDVVTMLLKYVTTVKN* 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g03304 163 Coils Coil 63 112 - -
Rops8g03304 163 Gene3D - 53 163 - -
Rops8g03304 163 FunFam V-type proton ATPase subunit G 56 163 - -
Rops8g03304 163 Pfam Vacuolar (H+)-ATPase G subunit 60 162 IPR005124 GO:0016471|GO:0046961|GO:1902600
Rops8g03304 163 PANTHER VACUOLAR ATP SYNTHASE SUBUNIT G 54 163 IPR005124 GO:0016471|GO:0046961|GO:1902600
Rops8g03304 163 NCBIfam V-type ATPase subunit G 59 162 IPR005124 GO:0016471|GO:0046961|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g03304 Rops-Chr8 71643842 71649580 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g03304 61 163 Primary Pumps ATPases(2) AT4G23710 72.816 1.50e-46 145
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g03304 K02152 - gmx:100305477 164.081