Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g03270 ATGGAGAGTAGCCTACTACTCATCCTCTCCTCTCTCGCACTCTCACTCTTACTGTTACTCTCCTCTAGTTTTTCCTCTGCTCAGATCATGCAAGGTTTTGTAAGTTTGGACTGTGGAGGTACAGAAAATTTCACTGATGAAATTGGTCTTGAATGGACTCCTGACAATAAGCTCACTTATGGAGAAATAAGCATTATATCAGTTGCAAATGAGACACGGAAGCAATACACGACACTAAGACACTTTCCTGCTGATTCCAGGAAATACTGCTACACACTTGATGTTGTCAGTAGGACAAGGTACCTACTAAGGGCAACATTCTTGTATGGGAACTTTGACAAAAACAATGTTTATCCGAAATTTGACATTTCTGTTGGGGCTACGCATTGGTCTACTATTGTTATATCTGATGCTAACACTGTAGAATTGCGAGAGCTTATCTTTTTGGCTACTAGTCCTACAGTGAGTGTATGCTTATCAAATGCAACCACTGGGCAGCCATTCATATCTACGCTTGAACTTCGACAATTCAATGGTTCAGTCTATTATACACAATCTGAGGAACAATTTTATCTTAGTGTCGCTGCAAGGATAAATTTTGGTGCAGAGAGTGATGCTCCAATCAGGTATCCTGATGACCCTTTTGATAGAATATGGGAGTCTGATTCTGTGAAGAAAGCAAATTATCTTGTTGATGTTGCAGCTGGAACTGAAAAAATTTCTACCAATGTACCAATTGATGTTAACAGAGATGAAATACCACCAGTGAAAGTTATGCAGACAGCTGTCGTGGAGATTGAAGATTTGGGTCCAAATGAATCCAGAAAGTTCAGGCTAGTACTTCCAGGCCAGCCTGATCTTAGCAAGGCTGCTGTAAATATTGAAGAAAATGCACAAGGGAAATATCGCCTTTATGAACCAGGATTTCCCAATATATCCCTACCCTTTGTTCTTTCTTTTAGATTTGGAAAGACATCTGATTCTTCTAAGGGTCCTCTCCTAAATGCCATGGAGATAAACATGTATCTGGAGAAAAATGATGGCTGTCTAGACGGAGCTGCTATTGCTGGTGTACTTTCACACTACTCTTCTGCAGACTGGGCACAAGAAGGAGGTGATCCATGTCTTCCTGTTCCATGGTCATGGGTCCGTTGTAGCTCAGATCCACAACCAAGAATAATTTCAATCTTGTTATCCAATAAAAACTTGACTGGGAATATTCCTTCAGATATCACCAAATTGAATGGTCTAGTTGAACTATGGCTTGATGGAAATATGTTAACTGGCCCATTACCAGATTTTACTGGATGCATGGGCTTAAAAATCATTCATCTTGAAAACAATCAGTTGACGGGTGTTCTCCCAACCTCTTTGGTGAACCTTCCCAATTTGAGGGAACTATATGTGCAGAATAATATGTTATCTGGAACAATACCATCAGATCTTCTGAGCAAGGATTTGGTTTTGAACTACTCTGGAAACATTAATCTTCATAGAGGAAGCAGAATAAAGGGCCACATGTATGTCATTATTGGTTCAGCAGCTGGGGCTTCTGTTCTACTTTTGGCTACTGTTATATCTTGCTTGTTTATGCGTAAAGGCAAGAAAAGATATTATGAGCATGACCACATAGTTTCTGCCCCTACTCAAAGGCTGGCTACTTGGAAGAGTGATGGTGATCCTGCAGAAGGTGCTCACTGCTTCAGTTTTTCTGAAATTGAAAATGCTACAAATAACTTTGAGAAAAAAATTGGGTCTGGTGGTTTTGGAGTTGTATACTATGGGAAACTGAAAGATGGAAAAGAGATAGCAGTTAAAGTTCTAACGAGTAATTCCTATCAAGGCAAGCGAGAGTTCTCCAATGAGGTGACTCTTCTTTCAAGAATACATCACAGAAACTTGGTACAACTTCTTGGGTATTGCCGAGATGAAGAGAATAGTATGCTTGTTTATGAGTTCATGCATAATGGCACACTCAAGGAACATCTTTACGGCCCATTAACACATGGACGGAGTATCAATTGGATTAAGCGCCTTGAGATTGCAGAAGATGCTGCCAAAGGAATTGAATATCTTCATACAGGTTGTGTTCCTGTTGTTATCCATAGAGACTTAAAAAGCAGCAATATTCTTCTTGACAAGCACATGAGAGCCAAGGTTTCAGATTTTGGTCTTTCCAAACTTGCTGTTGATGGAGTCTCCCATGTTTCAAGCATTGTTCGGGGGACTGTAGGATATCTGGATCCTGAGTACTATATTTCCCAGCAGCTGACTGACAAGAGTGATGTTTATAGTTTTGGCGTGATTCTTCTTGAACTCATATCTGGTCAAGAAGCAATATCAAATGAAAGCTTTGGTGTCAACTGCCGAAACATAGTCCAGTGGGCAAAATTACACATTGAGAGTGGAGATTTACAAGGTATTATTGATCCCTTGCTAAGGAATGACTATGATCTTCAATCAATGTGGAAAATAGCAGAGAAAGCATTGATGTGTGTTCAACCTCATGGATATATGCGGCCAACAATCTCAGAAGTTCTAAAGGAGATCCAAGATGCTATATCTATTGAGAGGGAGGCTGGAACATTAAGAGAAGGCAATTCAGATGAGATGACAAGAAATTCTTTTCATTCTTCCATGAACATGGGTTCAATGGATCTTGGTGGAGCTGAGAGTTATCTATCAATTGATGAATCCATTGTACAGCCTACTGCTAGATAG 2721 0.3999 MESSLLLILSSLALSLLLLLSSSFSSAQIMQGFVSLDCGGTENFTDEIGLEWTPDNKLTYGEISIISVANETRKQYTTLRHFPADSRKYCYTLDVVSRTRYLLRATFLYGNFDKNNVYPKFDISVGATHWSTIVISDANTVELRELIFLATSPTVSVCLSNATTGQPFISTLELRQFNGSVYYTQSEEQFYLSVAARINFGAESDAPIRYPDDPFDRIWESDSVKKANYLVDVAAGTEKISTNVPIDVNRDEIPPVKVMQTAVVEIEDLGPNESRKFRLVLPGQPDLSKAAVNIEENAQGKYRLYEPGFPNISLPFVLSFRFGKTSDSSKGPLLNAMEINMYLEKNDGCLDGAAIAGVLSHYSSADWAQEGGDPCLPVPWSWVRCSSDPQPRIISILLSNKNLTGNIPSDITKLNGLVELWLDGNMLTGPLPDFTGCMGLKIIHLENNQLTGVLPTSLVNLPNLRELYVQNNMLSGTIPSDLLSKDLVLNYSGNINLHRGSRIKGHMYVIIGSAAGASVLLLATVISCLFMRKGKKRYYEHDHIVSAPTQRLATWKSDGDPAEGAHCFSFSEIENATNNFEKKIGSGGFGVVYYGKLKDGKEIAVKVLTSNSYQGKREFSNEVTLLSRIHHRNLVQLLGYCRDEENSMLVYEFMHNGTLKEHLYGPLTHGRSINWIKRLEIAEDAAKGIEYLHTGCVPVVIHRDLKSSNILLDKHMRAKVSDFGLSKLAVDGVSHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNESFGVNCRNIVQWAKLHIESGDLQGIIDPLLRNDYDLQSMWKIAEKALMCVQPHGYMRPTISEVLKEIQDAISIEREAGTLREGNSDEMTRNSFHSSMNMGSMDLGGAESYLSIDESIVQPTAR* 907
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g03270 906 PANTHER OS07G0107800 PROTEIN-RELATED 440 854 - -
Rops8g03270 906 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 654 862 - -
Rops8g03270 906 Gene3D Transferase(Phosphotransferase) domain 1 654 873 - -
Rops8g03270 906 Gene3D Ribonuclease Inhibitor 357 502 IPR032675 -
Rops8g03270 906 Pfam Leucine rich repeat 434 474 IPR001611 GO:0005515
Rops8g03270 906 ProSiteProfiles Protein kinase domain profile. 578 854 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops8g03270 906 FunFam Leucine-rich repeat protein kinase family protein 352 503 - -
Rops8g03270 906 SUPERFAMILY L domain-like 378 484 - -
Rops8g03270 906 Pfam Malectin-like domain 36 265 IPR024788 -
Rops8g03270 906 SMART serkin_6 578 854 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops8g03270 906 FunFam Leucine-rich repeat receptor-like protein kinase 556 653 - -
Rops8g03270 906 ProSitePatterns Protein kinases ATP-binding region signature. 584 606 IPR017441 GO:0005524
Rops8g03270 906 Gene3D Phosphorylase Kinase; domain 1 555 653 - -
Rops8g03270 906 ProSitePatterns Serine/Threonine protein kinases active-site signature. 700 712 IPR008271 GO:0004672|GO:0006468
Rops8g03270 906 CDD STKc_IRAK 584 851 - -
Rops8g03270 906 MobiDBLite consensus disorder prediction 858 879 - -
Rops8g03270 906 SUPERFAMILY Protein kinase-like (PK-like) 564 848 IPR011009 -
Rops8g03270 906 Pfam Protein tyrosine and serine/threonine kinase 580 780 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g03270 Rops-Chr8 71238859 71246200 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g03270 25 688 Receptor kinase-like Gene Family AT2G37050 65.710 0.0 936
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Rops8g03270 PK_Tyr_Ser-Thr 1.2e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g03270 - - gmx:100784017 1627.07