Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Rops8g03263 | ATGCCGCCGAAGCAGCAATCCAAAGCTGATTTAGCGAAGAAGCAGAAGATCGTAGAGGACAAAACCTTCGGTCTCAAAAACAAAAGCAAAAGCAAAAACGTTCAGAAATATGTGCAGAATCTCAAACAATCCGTACAACCCAAGCCCGATCCTTCCAAAGTCGCTACCAAGAAAAAGAAGGAGGAAGAGAAGGCCAAGGACAAGGAATTGAATGATTTGTTCAAAATTGCGGTTAGTCAACCTAAAGTGCCAGTTGGTGTTGATCCTAAGTCTATATTATGTGAGTTTTACAAAGCGGGACAGTGTGCCAAGGGCTTCAAGTGCAAGTTTTCCCATGATTTGAATGTTCAGAGGAAAGGGGAAAAGATTGATCTTTATAGTGATAAACGTGACCAGGAAACAATGGACGATTGGGATCAGGAGACCTTGGAGAAGGTGGTGGAATCAAAGAGAACCGAGTATAAGCAGAATAAACCAACTGATATAGTTTGTAAATACTTTCTGGAAGCAGTGGAGAAGAAGCAATATGGTTGGTTCTGGGTTTGCCCCAATGGCGGTAAGAATTGCCACTATAGACATGCCCTTCCCCCTGGATATGTTTTAAAATCTCAAATGAAGGCTCTATTAGAGGAGGAAACTGAAAAAATAACAATAGAGGAGGATATTGAAAATCAGCGTGCCAAAGTGACAACTTCAACTCCTATGACTCCTGAATTATTCATGCAATGGAAGAAGAAGAAAATAGAAGAGAGAGATGCCAATTTGGCTGCCCAGCAGGCAGAGAGGGCTAAGAATGACCGCATGAGTGGTCGTGAGCTATTTTTATCAGATGCTAGCTGGTTTGTGGATGATGCTGAAGCATATGACAAGTACCAGAGGGAACCAGAATCTTATGACACTGAACAGAAGGCGACTGGGAATGCTACTGACGAAGGTCCGAGCACCTCAAAAGCTAGTACTGATGTTGAAGATCCTGATGATGTTGATGATGATGAACTGGACTTGGATGAGTTGAATGAATTGGAAGCAAGCTTGTCAAAGACATCAATCCAAATAAAGGAATAA | 1065 | 0.4207 | MPPKQQSKADLAKKQKIVEDKTFGLKNKSKSKNVQKYVQNLKQSVQPKPDPSKVATKKKKEEEKAKDKELNDLFKIAVSQPKVPVGVDPKSILCEFYKAGQCAKGFKCKFSHDLNVQRKGEKIDLYSDKRDQETMDDWDQETLEKVVESKRTEYKQNKPTDIVCKYFLEAVEKKQYGWFWVCPNGGKNCHYRHALPPGYVLKSQMKALLEEETEKITIEEDIENQRAKVTTSTPMTPELFMQWKKKKIEERDANLAAQQAERAKNDRMSGRELFLSDASWFVDDAEAYDKYQREPESYDTEQKATGNATDEGPSTSKASTDVEDPDDVDDDELDLDELNELEASLSKTSIQIKE* | 355 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Rops8g03263 | 354 | ProSiteProfiles | Zinc finger C3H1-type profile. | 88 | 115 | IPR000571 | GO:0046872 | |
Rops8g03263 | 354 | MobiDBLite | consensus disorder prediction | 323 | 339 | - | - | |
Rops8g03263 | 354 | Coils | Coil | 246 | 266 | - | - | |
Rops8g03263 | 354 | Gene3D | - | 87 | 204 | - | - | |
Rops8g03263 | 354 | ProSiteProfiles | Zinc finger C3H1-type profile. | 158 | 196 | IPR000571 | GO:0046872 | |
Rops8g03263 | 354 | Pfam | DRG Family Regulatory Proteins, Tma46 | 215 | 300 | IPR032378 | - | |
Rops8g03263 | 354 | PANTHER | ZINC FINGER-CONTAINING PROTEIN P48ZNF | 1 | 354 | - | - | |
Rops8g03263 | 354 | SMART | c3hfinal6 | 88 | 114 | IPR000571 | GO:0046872 | |
Rops8g03263 | 354 | SMART | c3hfinal6 | 158 | 195 | IPR000571 | GO:0046872 | |
Rops8g03263 | 354 | Coils | Coil | 208 | 228 | - | - | |
Rops8g03263 | 354 | MobiDBLite | consensus disorder prediction | 40 | 66 | - | - | |
Rops8g03263 | 354 | SUPERFAMILY | CCCH zinc finger | 88 | 113 | IPR036855 | GO:0046872 | |
Rops8g03263 | 354 | MobiDBLite | consensus disorder prediction | 291 | 354 | - | - | |
Rops8g03263 | 354 | MobiDBLite | consensus disorder prediction | 52 | 66 | - | - | |
Rops8g03263 | 354 | Gene3D | - | 205 | 279 | - | - | |
Rops8g03263 | 354 | MobiDBLite | consensus disorder prediction | 301 | 319 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Rops8g03263 | Rops-Chr8 | 71145068 | 71148179 | Wgd |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | C3H | Rops8g03263 | DFRP_C | 2e-19 | No_clan |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Rops8g03263 | - | - | gmx:100806617 | 596.66 |