Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g03259 ATGGTGTTATCTGTGATGGACTTTAGTTATTCCAGTTCATTTCGTACCTCAATCGATGCTATGGAGAGGTTAAACTCAGTGTTATACATACTGGGAAATGAGAATTCACCAAAGCCAACCCTGTTGCTTCTTCTCGGTTTTCTGGTGATCTTTATCTTGGTTCAATTGAAGCCATTACTTTTGGAAGAAAGGGTGGTTGTTGCCAAACCAGTTGCTTCAAGGCCTACTTGTTCGACTTTCAAATCCTTCTCAGAGCTCCTAGCAGGTGCAATCAATGCCCCTCCCCCTAATGCATCTTCTCAAACTACAGTTTCTGCCATTAGACCAAAGACAGTGAGGTTCAAGCCAGCAGTGAATCGCCCCGCTGCTGGGTTTGATTCTTCTCAGGCTGACATTTTTGGAGCTGCACCTGGTGATTCTACTGACATGAGTCCTAAACCTGACACCATGCAGCCCCTCATATACAAGCCAATGGCAAAACTTGTGTCAAAAACAACAGTTTCTCTTTTGGCAAATATGGGAAATAGCATTACTAGTCAGCAACAACCGCATCAATCAATGGAGGCCAATCTTCAACATCCCAACCATGAAAAATTTAGAACCAATGTGAGCTCAAATCTTCATCAAAGCATTACCCCACATGCAGAAACATATCAGACCACTGAACCTTGTAAGATGGTACAGCAGAACCAAGAGGAGGTCCAAAAAGCTTTAACTTCCACAGCTAATGGTGATAGACCTTCTTATGATGGTTATAATTGGAGGAAATATGGGCAGAAGCAAGTAAAAGGAAGTGAGTACCCAAGAAGTTATTACAAGTGTACACATCCTAATTGTCCAGTGAAAAAGAAGGTTGAAAGATCATTTGATGGGCAGATTGCAGAAATTGTTTATAAAGGTGAACACAACCATGCAAAGCCACAGCTTCCTAAGCGAAACTCAACAGGAACACAAGGATCAGGAATGATGTCTGATGGAATGGTTCAAGATATATGGAGTAATAATAATAACAGTGAGAAGAATGAAGTCAACGAAGGTAGAATAGAGAACCAGAATAATACAGGAATGTCGGTGCATTCAGCTTATCATGCCAAAGCTCCACAGACTAATGATTCTGTTCTAATTGGTGCAATTAATGCTCGTGGAGGAAACACAGAAAATTCTTGTGGTCTAAGTGGGGAATGTGAGGAAGGAAGCAAGGGATTTGAGGCAGAGGAAGATGAACCAAGAAGTAAAAGAAGGAAAAATGAGAATCAATCCAATGAAGCAGCAGTATCAGAGGAAGGTCTAGTAGAGCCACGCATTGCGATGCAAAGTTCTGTGGATTCTGAAATACTTGGAGATGGTTTTCGCTGGAGGAAATATGGGCAGAAAGTGGTGAAGGGCAATCCATATCCCAGGAGTTACTATAGATGTACTAATATCAAGTGTAACGTTCGCAAACATGTGGAGAGAGCAATAGATGACCCTAGATCATTTGTGACTACATATGAGGGAAAGCACAACCATGAGATGCCACTCAAGAACACAGGAAGTTTGGCCTCTGAAAAAGATTCACAAGCTTCTCTTAGTAAAGATAAACCATTTTGA 1590 0.4145 MVLSVMDFSYSSSFRTSIDAMERLNSVLYILGNENSPKPTLLLLLGFLVIFILVQLKPLLLEERVVVAKPVASRPTCSTFKSFSELLAGAINAPPPNASSQTTVSAIRPKTVRFKPAVNRPAAGFDSSQADIFGAAPGDSTDMSPKPDTMQPLIYKPMAKLVSKTTVSLLANMGNSITSQQQPHQSMEANLQHPNHEKFRTNVSSNLHQSITPHAETYQTTEPCKMVQQNQEEVQKALTSTANGDRPSYDGYNWRKYGQKQVKGSEYPRSYYKCTHPNCPVKKKVERSFDGQIAEIVYKGEHNHAKPQLPKRNSTGTQGSGMMSDGMVQDIWSNNNNSEKNEVNEGRIENQNNTGMSVHSAYHAKAPQTNDSVLIGAINARGGNTENSCGLSGECEEGSKGFEAEEDEPRSKRRKNENQSNEAAVSEEGLVEPRIAMQSSVDSEILGDGFRWRKYGQKVVKGNPYPRSYYRCTNIKCNVRKHVERAIDDPRSFVTTYEGKHNHEMPLKNTGSLASEKDSQASLSKDKPF* 530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g03259 529 ProSiteProfiles WRKY domain profile. 250 307 IPR003657 GO:0003700|GO:0006355|GO:0043565
Rops8g03259 529 FunFam WRKY transcription factor 231 308 - -
Rops8g03259 529 SUPERFAMILY WRKY DNA-binding domain 247 307 IPR036576 GO:0003700|GO:0006355|GO:0043565
Rops8g03259 529 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 185 521 IPR044810 GO:0003700
Rops8g03259 529 MobiDBLite consensus disorder prediction 385 429 - -
Rops8g03259 529 MobiDBLite consensus disorder prediction 403 421 - -
Rops8g03259 529 MobiDBLite consensus disorder prediction 301 342 - -
Rops8g03259 529 FunFam WRKY transcription factor 57 432 506 - -
Rops8g03259 529 SUPERFAMILY WRKY DNA-binding domain 440 506 IPR036576 GO:0003700|GO:0006355|GO:0043565
Rops8g03259 529 Pfam WRKY DNA -binding domain 448 504 IPR003657 GO:0003700|GO:0006355|GO:0043565
Rops8g03259 529 Pfam WRKY DNA -binding domain 250 304 IPR003657 GO:0003700|GO:0006355|GO:0043565
Rops8g03259 529 Gene3D WRKY domain 219 308 IPR036576 GO:0003700|GO:0006355|GO:0043565
Rops8g03259 529 Gene3D WRKY domain 432 507 IPR036576 GO:0003700|GO:0006355|GO:0043565
Rops8g03259 529 MobiDBLite consensus disorder prediction 499 529 - -
Rops8g03259 529 MobiDBLite consensus disorder prediction 309 342 - -
Rops8g03259 529 SMART WRKY_cls 446 505 IPR003657 GO:0003700|GO:0006355|GO:0043565
Rops8g03259 529 SMART WRKY_cls 248 306 IPR003657 GO:0003700|GO:0006355|GO:0043565
Rops8g03259 529 ProSiteProfiles WRKY domain profile. 441 506 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g03259 Rops-Chr8 71095837 71106969 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g03259 148 507 WRKY Transcription Factor Family AT2G37260 46.561 2.51e-90 279
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Rops8g03259 WRKY 8.6e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g03259 - - gmx:100794069 748.429