Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g03256 ATGCGGGGATCGGCGGTGCCGTACGCGGAAGCTCGGAAACCGAGCTTCGGGAGTGACCGAAGAGAGATCCGGGGTTTTGCAGAGAGAGAAGGAGATTGGGCTTTGGAACGAACCCGAGAAGTTAATTGGACCTTTGAGTTCGAGGGAAGAAGGGTTGTGGTACTGGTTTTGGGAGATAAGGGACTCCAAGACAAGATCAAACTGGTTCCTATTGACCTTCTAAACAGGCCTGCTTGGTATAAGGAGAAAGTCTACCCTGAAAACAAGGTGCCATCGTTGGAGCACAATGGGAAGGTCTTGGGAGAAAGTCTAGATTTGATCAATTACATAGATGTCAACTTTGAAGGGCCATCTCTAGTTCCCAGTGATCCTACCAAGAAAGAGTTTGGTGGGCAGTTGATTTCTCATGTTGATACATTCACCAAAGACCTGTACTCTTCATTGAGAGGAGATTCCATAAAGCAAGCCAGTCCTGCATTTGATTACTTGGAGAATGCTCTTGGTAAATTTGATGATGGACTATTCCTTCTTGGTCACTTCAGTTGGGTGGATATTGCCTATGTTCCATTTGTTGAAAGATTCCAACTCGTCTTTGCTGATGTGTTCAAGCATGATATAACTGAAGGAAGGCCTAAACTTGCAGCATGGATCCAGGAGGTGAACAAGATTGATGCTTATACACAGACAAGAGCTGATCCTCAAGAACTCGTTGATATTTTCAAGAAACGTTTTTTGGCTCAGCAGTAA 747 0.4485 MRGSAVPYAEARKPSFGSDRREIRGFAEREGDWALERTREVNWTFEFEGRRVVVLVLGDKGLQDKIKLVPIDLLNRPAWYKEKVYPENKVPSLEHNGKVLGESLDLINYIDVNFEGPSLVPSDPTKKEFGGQLISHVDTFTKDLYSSLRGDSIKQASPAFDYLENALGKFDDGLFLLGHFSWVDIAYVPFVERFQLVFADVFKHDITEGRPKLAAWIQEVNKIDAYTQTRADPQELVDIFKKRFLAQQ* 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g03256 248 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 37 118 IPR004045 -
Rops8g03256 248 Pfam Glutathione S-transferase, N-terminal domain 51 117 IPR004045 -
Rops8g03256 248 SUPERFAMILY Thioredoxin-like 52 118 IPR036249 -
Rops8g03256 248 Gene3D - 116 248 - -
Rops8g03256 248 CDD GST_C_Lambda 123 241 - -
Rops8g03256 248 Gene3D Glutaredoxin 50 115 - -
Rops8g03256 248 PANTHER GLUTATHIONE S-TRANSFERASE L1 55 244 IPR044629 GO:0004364
Rops8g03256 248 Pfam Glutathione S-transferase, C-terminal domain 153 218 - -
Rops8g03256 248 SUPERFAMILY GST C-terminal domain-like 114 244 IPR036282 -
Rops8g03256 248 FunFam Lambda class glutathione S-transferase 116 247 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g03256 Rops-Chr8 71061761 71078121 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g03256 60 245 Glutathione S-transferase Gene Family AT5G02790 66.129 1.04e-91 268
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g03256 K00799 - gmx:100793025 333.954
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops8g03256 8 71061761 71078121 Rops6g01091 6 25433922 25452628 ECH
Rops8g03256 8 71061761 71078121 Rops8g03256 8 71061761 71078121 ECH
Rops8g03256 8 71061761 71078121 Rops6g01091 6 25433922 25452628 PCT