Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g03238 ATGGCTTCAAAGTTGACTCCTATGAGGTCCACACAAGAGAAATTAGTTGAAAAGCCAAGTTCATTAAAGGCCAAATGGGATGACTTCACTACTGGAGCTTTTTTGGATGTACGTCTTGAGGAAATAGTTGCTGGAAATAGGCCTCATTCTCACTTCACTAAGGAAGGATGGAAGAATATAATTGCGAAGTTTTATGAAAAAACAGGTTATAAGTATGACCAAAAACAGTTGAAAAATAGGTGGGATGCTCTGAAAAGTTATTTTACTTTATGGGCAAAGCTTGTTGAAAATAGGACTGGTTTAGGATGGGATCCTGTTAAAAAAACCATAGAAGCACCTTCAGAATTTTGGGAAGCTAGAAAAAAGGAAAACCCAGAGTTTCTAAAGTTTAGGTATCGAGGTCCTTTACACTTGGATAAGTTGGAAGCATGTTTTAAGGATGTAATTGCTACAGGTTATATAGCTATGACACCGTATACAGATCCATCATCGGATGAGATGGGGATTTATGATGAAAGAAATGACACTGATCATGAGGGTTTAGGTAAAGATGGAGGGGACTTTGATGATGTTGTTCTTGAAGAAACTTATCCTCCACATATTACAGAGCACAATCCTTCACTCAACAATCCAAAAAAGAGGAAAAATGAGGGGGGAAGAGATGAGAAACGACTTGGTAAAGCAGATAAACTTCAACGTTCCCTTGATCGCATAATTGATGGACTAACATCCATGATGAGTTCTGACTCGGATATAGGCACAGATGATGAGAGTGTTGGAAATGCAATGTTTCACCAATTCCAACTTTCAAGAATGGTAGCTGCTATTGCAGTTACAAGGTATCACTTGAAGCATGTTGTGAAAGAGAAAAAGAGGACATCAATTTTAACAGGGCACATGTGGTTAGAAGAATTAAAGATGGGAAATGAAAATCAATTTTTTGAACAATTTCGAATGAGAAAACATGTGTTTAAGCAGTTAGTAAGTGACTTAAATCAGAAGTATGGATTAGAACCAACAAGACATGTTGACATAGAAGAGGCTGTAGCAATTTTTTTATATATGATTGGTCATGGAGCTACATACAGAATTGCAGAGGAGAGATTTCAACACTCAGGAGAGACGATTTGTAGACAATTTTATCGAGTGTTGAAATCTGTTAGGAAACTTGGAAATGAGAACATTAGGCCTATTGATAATAGGTTTAGGGATGTTCCGAATCACATTAGGGATGATGAACGATATTGGCCTCATTTCAAGGATTGCATTGGGGCTATAGATGGCACTCATATAGCTATCCATGTACCTATGGACAAGCAAACACCTTTCACTTGCAGAAAAGGATACACGAGCACTAATGTATTAGCAATTTGTGATTTTGATATGTGTTTTACATTTGCATGGCCTGGTTGGGAAGGTGCTGCACATGATACAAGAATTTTTATGGAGGCACTTCGAAAGCCAGAATTACAGTTTCCTCATCCACCTATAGGAAAGTATTATTTGGTTGATTCAGGATACCCAACATTTAAAGGATTCTTAGGGCCTTACAAAAATTCACGATATCATCTTCCTCAATTTAGGTCATCTTTTAGATTACAGAATACTCATACTTTTAGATCACATGATGAAGCTTTTAATTATTATCATTCAAGTTTGAGGAGTGTTATTGAGAGAACTTTTGGAGTTTGTAAAGCAAGGTGGAGGATTTTGCAAAATATGACTAACTTTAAGCTGAAGACTCAATTTCAAATCATATGGGCATGTTTTGCTCTTCACAACTACATAAGAAGAATGGACTCAAATGATGTAAGTCTCCTTGAACAATTTGAGAATATTTCTGAGATGGAAGGCATGGAGGGAGACCATGATGATGATAATCCAAGTCAAGTTGAATGGGCAGAACCAACTCAAGAAGATGTTAAATACATGGTGGAAGGTCTCTCATTTGCTTTCTTCGCCATCAAATACATACACTACCAACAAGACTTGGTCACCTCAAAATCTGGTCCTCCACGACCATGGCTCGGCCTCGATGGCCTCACTGTCGCTCTCGCCGCCGTACTCTTCCTAGTCCTCCCCACCGGCGTCGAAGACACGCCTTTGGATAATCACAGTGAAGAACAAGAAGAAGATGTTGTTGTTGTTGATCAAAGAAACAGGGTTAGACGTAGGTTGAGGGTTTTGTCTGTTGTACCTGCGGCTCTTATTCCGTTATCAATTTTGAATTCGATTATTGCATTTTGTAAGTTGTCGGGGAATTTAATTCCTGAAAGAGAGGCTTCAGCTATGCATGTTTCAGTGAGTGTTGGGATTATGAACTTTGTGGGGTGTTGGTTTGGTGCCATGCCTTGTTGCCATGGTGCTGGTGGAGGACACAGCGACCTGTTAGAAGAATGCACAACAAGGGTGGGTGGAGGAGACAACAACTTGTTAGAAGAAGACACAACAAGGATGGGTGGAGGTGAAAGGAAGGTGGAGAAGATGGGAGGGGTAAAAGTATTTTTGAGTGAAAAAATGGAGTGA 2526 0.3915 MASKLTPMRSTQEKLVEKPSSLKAKWDDFTTGAFLDVRLEEIVAGNRPHSHFTKEGWKNIIAKFYEKTGYKYDQKQLKNRWDALKSYFTLWAKLVENRTGLGWDPVKKTIEAPSEFWEARKKENPEFLKFRYRGPLHLDKLEACFKDVIATGYIAMTPYTDPSSDEMGIYDERNDTDHEGLGKDGGDFDDVVLEETYPPHITEHNPSLNNPKKRKNEGGRDEKRLGKADKLQRSLDRIIDGLTSMMSSDSDIGTDDESVGNAMFHQFQLSRMVAAIAVTRYHLKHVVKEKKRTSILTGHMWLEELKMGNENQFFEQFRMRKHVFKQLVSDLNQKYGLEPTRHVDIEEAVAIFLYMIGHGATYRIAEERFQHSGETICRQFYRVLKSVRKLGNENIRPIDNRFRDVPNHIRDDERYWPHFKDCIGAIDGTHIAIHVPMDKQTPFTCRKGYTSTNVLAICDFDMCFTFAWPGWEGAAHDTRIFMEALRKPELQFPHPPIGKYYLVDSGYPTFKGFLGPYKNSRYHLPQFRSSFRLQNTHTFRSHDEAFNYYHSSLRSVIERTFGVCKARWRILQNMTNFKLKTQFQIIWACFALHNYIRRMDSNDVSLLEQFENISEMEGMEGDHDDDNPSQVEWAEPTQEDVKYMVEGLSFAFFAIKYIHYQQDLVTSKSGPPRPWLGLDGLTVALAAVLFLVLPTGVEDTPLDNHSEEQEEDVVVVDQRNRVRRRLRVLSVVPAALIPLSILNSIIAFCKLSGNLIPEREASAMHVSVSVGIMNFVGCWFGAMPCCHGAGGGHSDLLEECTTRVGGGDNNLLEEDTTRMGGGERKVEKMGGVKVFLSEKME* 842
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g03238 841 PANTHER UNCHARACTERIZED 266 631 - -
Rops8g03238 841 Pfam DDE superfamily endonuclease 426 594 IPR027806 -
Rops8g03238 841 Pfam Molybdate transporter of MFS superfamily 737 792 IPR031563 GO:0015098|GO:0015689
Rops8g03238 841 Pfam Myb/SANT-like DNA-binding domain 25 119 IPR024752 -
Rops8g03238 841 MobiDBLite consensus disorder prediction 198 227 - -
Rops8g03238 841 MobiDBLite consensus disorder prediction 207 227 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g03238 Rops-Chr8 70884555 70907846 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g03238 646 791 Inorganic Solute Cotransporters AT2G25680 37.949 1.17e-28 118
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g03238 - - psat:127137181 447.973