Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g03232 ATGAAAAGATTTTGCTTAAACCCCAAGACGCCGTCGTTTTCCTTGGTCCGCCATCCTCCATCTTTGCCTGCACCCTCCGGCCCAAGCCCAAGCCCAAGCCCAAAACCTCCGCGGCTGAGCCTTCCCGATCCTAGTAGTAGCATCGACGAAGAGAGGTGCATCGAGGAAGCAGAGGCACTGATACTGAAATGGAACGCAGAAAGCTCAGCTTATGCGAATGTCACCTCTCTCTTCTACGAGGATAAAACCGAAGCAAAGCAATACATCAATTGTGTTAACCAGCTTCAGAAGGCCATGCATTCCTTGCTCTCCAAGAATCCTTCTTCAGAGAAACTCATCCTCGCTCATAACCTGATGCAGATGGCCATGAAGAGGCTTAAAAAAGAGTTCTACCAGATTTTATCCATGAACCGGGCCCACCTTGACCCTGAATCCATGTCCGCCAGATCCTCCCGCACCTCCGTCCATTCCAACACCTCCGACTACAACGATGACGATTTCACCGCCGAAGACGACGTTCGCGACGCCGCCGATTCTATCTCAGAAGTCGAATTGGTTTCTTCCATAGTCATGGCGGATCTGAAATCCATCGCAGACTGCATGATCTCTTCCGGTTATGCGAAAGAATGCGTCAGCGTTTACAACGTGATCAGAAAATCCATCATAGAAGAAGGCATTTATCGCCTCAACGTGGAGAAACTTAGCTCCTCGCGTGTCAACAAGATGGATTGGGAAATCCTTGAGTTGAAGATCAAGAGTTGGTTAGAGGCAATGAGGATTTCGGTTAGGACGCTCTTCAACGGAGAGAGAATCCTCTGCGATCATGTCTTCAGTTCTTTAGACTCCATCAGAGAAGCTTGCTTCGCAGAAATTTCTAGAGACAGTGCTACTCTTCTTTTCGGTTTCCCCGAACTCGTCGCCAAAACTAAGAAATCGCAGCCGGAGAAGATGTTCCGCGTGCTTGATATGTACGCCGTTATTTCCGCTCTCTGGCCGGAGATCGAATCAATCTTCTCTTCCGATTTAACCTCCGGCGTTCGATTTCAAGTCCTCGCTTCGCTTCAACGACTCGTCGAGTCCGTTCAAGCAATGCTCTCGGAGTTCGAATCAACGATCCAGAAGGACTCTTCCAAGTTGCCGGTGAAAGGCGGCGGAGTGCACTCACTCACAATTCAGACGATGAATTACCTCTCAATCCTCGCCGACTACATCAACATCCTCTCTGATATATTCTCGCAAGCGGACTTGCCTCCTCCGCCCAAATCATCGTCGCTGCCGGAATCTTATTTATACACTCCAGAATCCGACGACTCGACGGTGACGCCGGCGCTGACGGCTCGTGTGGCATGGCTAATTCTCGTCCTCCTTTGCAAGCTCGACAGCAAAGCAAAGCAATTCAAAGACGTTTCGCGTTCTTACCTGTTTCTCTCGAACAATATCCGGCACGTGGTTACCAGAGTCCGAAGCTCGAACTTACAGTACGTTCTTGGAGACGATTGGGTCGCGAAGCACGAAGCAAGGGTGAAAAGGTTCATTGCAAACTACGAGAAGGTAGCATGGGGAGGAGTGTTTTCGTCGTTGCCGGAAAATCCGTCGGCGGCTGAAGCTAGGGAGGTGTTCGAGAACTTCAATTTCAGATTCGAAGAAGCGTATCGGAAACAGAACACGTTCGTCGTAGCTGATAGAGAACTGCGAGATGATATAAAAGGTTCGATCGCGAGAAATATAGTGCCGAGATATCGTGAGTGGTATAATACAGTGCTTGCTACAGCGGGATCGGCGAGAAATATGACGCTGATGGAGTTTGTCACTTTTACCCCTGAAGATGTTGATAATTACCTGGCTAACCTATTCTTCTTTGGAACAAGTTTCAGCGGTCGATCGTCGTCGGTTACTTCGTCTCCTAATTGGCGGCGGAGTTAA 1923 0.4925 MKRFCLNPKTPSFSLVRHPPSLPAPSGPSPSPSPKPPRLSLPDPSSSIDEERCIEEAEALILKWNAESSAYANVTSLFYEDKTEAKQYINCVNQLQKAMHSLLSKNPSSEKLILAHNLMQMAMKRLKKEFYQILSMNRAHLDPESMSARSSRTSVHSNTSDYNDDDFTAEDDVRDAADSISEVELVSSIVMADLKSIADCMISSGYAKECVSVYNVIRKSIIEEGIYRLNVEKLSSSRVNKMDWEILELKIKSWLEAMRISVRTLFNGERILCDHVFSSLDSIREACFAEISRDSATLLFGFPELVAKTKKSQPEKMFRVLDMYAVISALWPEIESIFSSDLTSGVRFQVLASLQRLVESVQAMLSEFESTIQKDSSKLPVKGGGVHSLTIQTMNYLSILADYINILSDIFSQADLPPPPKSSSLPESYLYTPESDDSTVTPALTARVAWLILVLLCKLDSKAKQFKDVSRSYLFLSNNIRHVVTRVRSSNLQYVLGDDWVAKHEARVKRFIANYEKVAWGGVFSSLPENPSAAEAREVFENFNFRFEEAYRKQNTFVVADRELRDDIKGSIARNIVPRYREWYNTVLATAGSARNMTLMEFVTFTPEDVDNYLANLFFFGTSFSGRSSSVTSSPNWRRS* 641
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g03232 640 PANTHER EXOCYST COMPLEX PROTEIN EXO70 47 618 IPR004140 GO:0000145|GO:0006887
Rops8g03232 640 Coils Coil 351 371 - -
Rops8g03232 640 MobiDBLite consensus disorder prediction 1 48 - -
Rops8g03232 640 MobiDBLite consensus disorder prediction 21 41 - -
Rops8g03232 640 Pfam Exo70 exocyst complex subunit 252 615 IPR046364 GO:0000145|GO:0005546|GO:0006887
Rops8g03232 640 SUPERFAMILY Cullin repeat-like 54 618 IPR016159 -
Rops8g03232 640 MobiDBLite consensus disorder prediction 144 162 - -
Rops8g03232 640 MobiDBLite consensus disorder prediction 144 167 - -
Rops8g03232 640 Gene3D Exocyst complex component Exo70 66 623 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g03232 Rops-Chr8 70780588 70782510 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g03232 54 618 EXO70 exocyst subunit family AT3G09520 55.208 0.0 615
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g03232 K07195 - gmx:100810548 871.692
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops6g01112 6 25679049 25680485 Rops8g03232 8 70780588 70782510 PCT