Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g03226 ATGCCGACACTCAAAGGAAGCAAGCAGGTTCAACGACGTTCAAAACTTACGGGTTTTCCTTCTGATTCTGGTTCTTGCGGTAGTGATGTTGCAGATGAAGATTCGAATTCATTTCAATTGGGGTGGAGATCTTCAAAACAACAGTTCGGAACTCCCATGAAGAAGTTATTAGATGCAGAGATGTCTCGAAAAACTGGATCCAAAAAGAGAGCCCCTGGTGTTATTGCCAGATTAATGGGTCTTGATGGGCTTCCATTGCAGTTGCCTACCAATAAGCAACATAAGGGTTCATCAGAAAACCATCTAAAAAGGACAACACAAGCAGCAAAAACTCGAAACAATGGTACACTATACGATGGTCGATCATCATCTAGGAGAAGCTCAAAGGATCAGCAAGAGTTCAAAGATGTATTTGAGGTCTCGGAGATCCCGAAGGTAGAGAGCAGTAGGTATTCATCGCAGGGTTCTGTAGACTTGAAGATCACTGATGCTGAAATGTCATTCACTGAACAGAAGTTCATGGATGCCAAACGCCTTGCAACTTATCAGGATTTACAGTCTTCACAGGATTCCCATGATACACTTGAGATTTTAGACTCTAACAATGATCTTCTGCAAAAATATTTTAAGCGGCCAGATTCTTTGTTTAAAAAACATCTAGATGATCTGCAAGCTTCCCCTCTCCAATCACATTCTGGTCATGCAGAAGCTACAAAATCATCATATATAAAGAGTTATGAACATGGTGACTTCAGCTGGAAGTCAGACAGGGAGTTGACAGGGTTGAATTACAAAAGATCTCAACAGAAGCATCATGATGGTTTTTCTTGCAGTGTTGACAGAAGACACGCAGTGCATAGTTCACCAAAATCATCAAAGCTTCAGTTTAAGGGAAGGGATGAACTTGATGTAGTCCCAACAAGGATTGTTGTCCTAAAACCTAATCTTGGAAAAGTGCAGAATGCTACCAAAATTGTTTCATCACCTTGTTCTTCACACACTTTTCTGTCGGAGTGTGGAAAGTATGCTGAATTTTCAGATGTCAGATTTAGGGACATTGAACTGAATCGAAAGAAAAATTTGCCTGGTACTGCCTCTCATTCAAGGCAAAATTCTTTGGAATCTAGAGAAATCGCAAAGGAAATCACTAGCCAGATGAAAAATAGTTTGAATAATGGCTCCATGATATTTTCATCTTCTAGATTTAGAGGACATAATTGGGACGATAGCTCATGTAGTTCTTCTGGGAATCAATCTCCAGAGGAATCTGAGGTAACAACTGCAACTTTGGGAAACTCGTTTAACACAAGTAATGCTCTTAAGCCATCATCCCATTGTAGTGAATCATCTGTGAGTAGAGAGGCAAAAAAGAGATTATCAGAAAGGTTGAAAAAATCGCTCAAGTCTCAACAAGGCCAATCCATGTGCAGGAGCAGCACACTGGCCGAAATGCTTGCTATCCCTGACAAGGAAATGAAAGCAGCTAATTTTGACAGCATCTCTTCTGGGGAAGGTTTCCATGGTAAACTTGCTAGCAATGGTAAACCTGCTGGGTGGGTTGTACCAGTTGGTATCAGCAGCAGGGATGGTTGGAAGGATGGATTAATTGGAAGGTTACCACGGTCAAAGTCTCTTCCTGCTTCATCTACTGCCTTTGGAAGTCCCAGAACAATCTTGCGCCGTAAAGCACTTTGTGATGATCGATTTATGACACCAAAGGAAGCCTTTAAACAGGAAAGGAAAAAGGTAGTGAAATGTCCTGATCAGAGACGGTGTATGAATACCAGAAGCTCAAAATCTGGTCACGAGAAGTCTTGGTCTTCTCAGTCCTTAAAGGTAGAAGGTGATGAGTCTTCTTCACCAGACCTAAATACAATTCAAAATAAAATGAACATCAGTCTTGATGAGGATTTACCCAAGCAAGAAGTTCTGGCTGCCGAATCATTAGTTGAGATCCTCACAGATACTACTGCAGTTACTGTAGATGCTGTGGATGTGGCAAATGAAAATGCAGCTGGGTTATCTGAGTCTTGTAATATGGTGCCTCCTGAGTTATCTTCTAGTGTTTTGATCAAAGGTGACACTAATGCTGTTGACAGAGACAATTTAATGCAGCAGGAACTATCAGTTGGGTCTTCCAGTAGAAATTCTGTCTCCTTTCAACCATCTGTACCTGGACTTGAATCTTCATGTTGTAAAGATGTGGATCAACCTAGTCCAGTCTCAGTCCTAGAACCTTCTTTTACTGATGATGTGTCATCTTGTTCTGATTGTTTTGAAAGTCTCAGTGTTGACCTACAAGGGCTTCGAATGCAACTCCAGTTGCTGAAGTTGGAATCTGAAGAATATGTGGAAGGATCCATGCTAATTTCAAGTGACGAAGACGGTGAGGAAGCATCTACTGGAATTTTAGAAGACAATGGATTACGTAGAACTGAAGATAGCTGGGAGTCTTCCTACGTGATTGATGTCTTGTCTGAATCTGGTATTGATAGAGCTCAGCCTGAAGTATTTTTGGAAGTTTGGCATTCTCCAGAATGCCCGGTTAGTCTTTCAGTGTTTGATGAACTTGAAAAGAGGTACTCTGATTGGACTACTTGCCCAAGGTCCGAAAGGAGGTTGCTTTTTGACCGTATAAATTCTGGAATTGTCAATGTTCACGAGCAATTCATGAGTGCACAGCCATGGTTAAGCTCCACAGCCACAAATTTATGTTCTAAATTGATAAAAAAAGGGTTCCAAGACTGTCTGTACAGGATGCTAGAGAGCCAAGGAAAAATAAAAGATACCGCACTGGGGAAGGTGCTGGTTAGTCAATTACAGTGGTTGAACTTGAGAGATGATATTGATGTAATAGGTAGGGAAGTTGAGAGATTATTGTTAGATGATCTAGTAGCAGAGATAGCCGCTACATAG 2916 0.4115 MPTLKGSKQVQRRSKLTGFPSDSGSCGSDVADEDSNSFQLGWRSSKQQFGTPMKKLLDAEMSRKTGSKKRAPGVIARLMGLDGLPLQLPTNKQHKGSSENHLKRTTQAAKTRNNGTLYDGRSSSRRSSKDQQEFKDVFEVSEIPKVESSRYSSQGSVDLKITDAEMSFTEQKFMDAKRLATYQDLQSSQDSHDTLEILDSNNDLLQKYFKRPDSLFKKHLDDLQASPLQSHSGHAEATKSSYIKSYEHGDFSWKSDRELTGLNYKRSQQKHHDGFSCSVDRRHAVHSSPKSSKLQFKGRDELDVVPTRIVVLKPNLGKVQNATKIVSSPCSSHTFLSECGKYAEFSDVRFRDIELNRKKNLPGTASHSRQNSLESREIAKEITSQMKNSLNNGSMIFSSSRFRGHNWDDSSCSSSGNQSPEESEVTTATLGNSFNTSNALKPSSHCSESSVSREAKKRLSERLKKSLKSQQGQSMCRSSTLAEMLAIPDKEMKAANFDSISSGEGFHGKLASNGKPAGWVVPVGISSRDGWKDGLIGRLPRSKSLPASSTAFGSPRTILRRKALCDDRFMTPKEAFKQERKKVVKCPDQRRCMNTRSSKSGHEKSWSSQSLKVEGDESSSPDLNTIQNKMNISLDEDLPKQEVLAAESLVEILTDTTAVTVDAVDVANENAAGLSESCNMVPPELSSSVLIKGDTNAVDRDNLMQQELSVGSSSRNSVSFQPSVPGLESSCCKDVDQPSPVSVLEPSFTDDVSSCSDCFESLSVDLQGLRMQLQLLKLESEEYVEGSMLISSDEDGEEASTGILEDNGLRRTEDSWESSYVIDVLSESGIDRAQPEVFLEVWHSPECPVSLSVFDELEKRYSDWTTCPRSERRLLFDRINSGIVNVHEQFMSAQPWLSSTATNLCSKLIKKGFQDCLYRMLESQGKIKDTALGKVLVSQLQWLNLRDDIDVIGREVERLLLDDLVAEIAAT* 972
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g03226 971 Pfam Protein of unknown function (DUF3741) 170 214 IPR022212 -
Rops8g03226 971 MobiDBLite consensus disorder prediction 85 136 - -
Rops8g03226 971 MobiDBLite consensus disorder prediction 432 449 - -
Rops8g03226 971 MobiDBLite consensus disorder prediction 591 622 - -
Rops8g03226 971 MobiDBLite consensus disorder prediction 588 622 - -
Rops8g03226 971 MobiDBLite consensus disorder prediction 450 465 - -
Rops8g03226 971 PANTHER AFADIN 7 969 - -
Rops8g03226 971 MobiDBLite consensus disorder prediction 1 73 - -
Rops8g03226 971 MobiDBLite consensus disorder prediction 408 427 - -
Rops8g03226 971 MobiDBLite consensus disorder prediction 1 51 - -
Rops8g03226 971 Pfam Domain of unknown function (DUF4378) 818 967 IPR025486 -
Rops8g03226 971 MobiDBLite consensus disorder prediction 432 475 - -
Rops8g03226 971 MobiDBLite consensus disorder prediction 102 122 - -
Rops8g03226 971 Pfam DUF761-associated sequence motif 66 85 IPR032795 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g03226 Rops-Chr8 70584932 70590174 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g03226 46 970 TRM (TON1 Recruiting Motif) Superfamily AT3G53540 37.092 9.09e-140 440
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g03226 - - pvu:PHAVU_001G171300g 1254.58