Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g03217 ATGGATGTTCTAACCAAGGATGCTCTGAACAAAGGAATGAGCAATTATGTGTTTGTAGTCTATCGCCATGCTGTTGCTTTCGTTGTCATGGTACCTTTCGCATTGATCTTGGAGAAGAAAGTGAGGCCAAAGATGACATTTTCAATCTTCATGAAGATAGTGGCACTCAGTGTGCTAGAGCCAGTTATTGACCAGAATTTTTATTTTTTGGGAATGAAGTACACAACAGCAACCTTTGCTTCTGCCATGATCAATATCCTTCCTGCCATTACCTTTCTCATGGCTTGCATTTTTAAGCTTGAGAAGATAAAAATAAAAAGCATACGCAGTCAAGCAAAGGTGGTGGGGACTTTAGCCACTGTTGCAGGTGCCATGGTCATGACATTGATTAAAGGCCCAGTACTTGAGCTTTTTGGGAAACACGTAAGCAATACCCACAACCAGCATAACGGTGGGGCAAATCTTCAACATGCAATAAAGGGATCAACGATGATCACAATTGGCTGCTTTAGTAGTGCTGGTTTCATGATTCTCCAAGCTATTACCCTTGAAGCCTACCCTGCTGAGCTCTCTCTTACAGCATGGATATGCCTATTGGGAACAGTGGAAGGTGGCATAGTAGCCCTGATTATGGAAAGGGGTGACCATTCGGTTTGGTCTCTGAATTGGGATACAAAACTGCTAGCTGCTGTCTACAGTGGCATAGTTTGCTCAGGAATGGCTTATTACATCCAAGGAGTCGTAATGAAATATAGAGGCCCAGTCTTTGTAGCAATATTTAGTCCCTTGTGCATGGTCATTGTGGCTATCATGGGTTCCTTTTTTCTGCATGAGCAAATGTACCTTGGAAGGGTGATAGGTGCCATTGTCATTATTTTAGGGCTATATATGGTGGTTTGGGGTAAAAGCAAAGATTACGACTCACCTAATGAGCATATATTGCCAGCTAAGCCAACTGCAGACGAAAGCAATAACAAAGAGGAGCATTCTAATCACGAGGTCATCACTCTCAATAATTTTGGTCCGGAAAACATAGCTCGAGATGAACAAGTATGA 1056 0.4242 MDVLTKDALNKGMSNYVFVVYRHAVAFVVMVPFALILEKKVRPKMTFSIFMKIVALSVLEPVIDQNFYFLGMKYTTATFASAMINILPAITFLMACIFKLEKIKIKSIRSQAKVVGTLATVAGAMVMTLIKGPVLELFGKHVSNTHNQHNGGANLQHAIKGSTMITIGCFSSAGFMILQAITLEAYPAELSLTAWICLLGTVEGGIVALIMERGDHSVWSLNWDTKLLAAVYSGIVCSGMAYYIQGVVMKYRGPVFVAIFSPLCMVIVAIMGSFFLHEQMYLGRVIGAIVIILGLYMVVWGKSKDYDSPNEHILPAKPTADESNNKEEHSNHEVITLNNFGPENIARDEQV* 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g03217 351 MobiDBLite consensus disorder prediction 311 333 - -
Rops8g03217 351 PANTHER WAT1-RELATED PROTEIN 1 306 IPR030184 GO:0016020|GO:0022857
Rops8g03217 351 SUPERFAMILY Multidrug resistance efflux transporter EmrE 21 129 - -
Rops8g03217 351 SUPERFAMILY Multidrug resistance efflux transporter EmrE 219 304 - -
Rops8g03217 351 Pfam EamA-like transporter family 11 127 IPR000620 GO:0016020
Rops8g03217 351 Pfam EamA-like transporter family 161 299 IPR000620 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g03217 Rops-Chr8 70388140 70391229 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g03217 1 351 Nodulin-like Gene Family AT2G37460 62.429 1.68e-161 455
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g03217 - - gmx:100777050 562.762