Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g03204 ATGACTTCATTCTTAAAGCCTGAGAATGCCCTGAAAAGGGCGGAAGAGTTGATCAATGTCGGGCAGAAGCAGGATGCTTTGCAGACTCTTCATGACCTTATTACTTCAAAAAGATACAGGGCATGGCAGAAGACACTTGAAAGGATTATGTTTAAGTACGTAGAACTGTGTGTTGATATGCGGAAAGGACGGTTTGCGAAGGATGGGCTCATTCAGTATCGTATCATATGTCAGCAAGTGAATGTTAGTTCACTGGAGGAGGTGATCAAGCATTTCATGCACCTGTCAACCGAGAAAGCTGAGCAAGCCCGTAGCCAGGCCCAGGCATTAGAAGAAGCCCTTGATGTTGATGATTTAGAGGCAGATAAAAGGCCAGAAGACTTGATGCTGAGCTATGTCAGTGGTGAGAAAGGAAAGGACAGATCTGATAGGGAGCTTGTTACTCCGTGGTTTAAATTTCTATGGGAAACTTACAGGACCGTGCTTGAAATATTGCGGAACAACTCAAAACTGGAGGCCTTATATGCTATGACAGCCCATCGAGCTTTCCAGTTTTGTAAGCAATATAAGCGAACAACAGAATTTCGAAGACTTTGTGAAATCATAAGAAACCATTTGGCCAATCTTAATAAATATCGAGACCAACGAGACCGGCCTGATCTTTCAGCTCCTGAAAGCTTGCAACTGTATCTTGATACAAGATTTGAGCAGCTGAAAGTTGCCACTGAACTTGAACTCTGGCAGGAAGCTTTTCGATCTGTCGAAGATATACATGGACTAATGTGCATGGTCAAGAAAACGCCCAAGCCATCCCTGATGGTTGTTTACTATGTTAAGCTGACAGAAATATTTTGGATATCATCGAGTCATCTATATCATGCATATGCATGGTTCAGGCTCTTTTTGTTACAAAAAAGCTTCAATAAGAATCTGAGTCAGAAGGATTTGCAATTAATAGCTTCATCTGTCGTTCTGGCTGCACTTTCAGTGCCTCCTCATGATCGCACTCATGGTGCATCTCATTTGGAACTGGAGCATGAAAAAGAGAGAAATTTGAGGATGGCAAATCTCATTGGATTTAATCTTGAAACTAAACCTGAAAGCAGAGAAGTGCTCTCAAGGTCATCACTTCTTGCTGAACTGGCATCAAAGGGTGTGATGTCTTGTGTAACTCAGGAAGTGAAGGACATTTACTATCTTTTGGAACATGAATTTCTTCCCTCGGATCTTGCACTAAAAGTGCTGCCCTTGTTAACTAAAATCTCAAAATTAGGGGGTAAGCTTTCCACTGCTTCATCTGTTCCTGAGGTTCAACTGGCTCAGTATGTCCCAGCTCTGGAAAAACTGGCTACCTTGAGGTTGCTACAGCAGGTGTCTAATGTGTACCAGACAATGAAGATTGAAACCTTATCTGGGATGATCCCATTCTTTGACTTTTCTGTAGTGGAAAAAATTTCAGTGGATGCTGTTAAGCAGAAGTTTGTATCAATGAAAGTTGACCACATGAAAAATGTTGTAATTTTTTGTAAAATGAGCCTTGAGTCTGATGGCTTAAGGGATCACTTGGCCAATTTTGCTGAACAATTGAACAAGGCAAGACAAATGATTCATCCTCCTGATGGGAAACCATCAAAACTTGGAGCTTTGCTTCCGACTTTGACGGAGGTTGTGGCCAAAGAACACAAGAGGCTCCTTGCTCGAAAATCAATTATTGAAAAAAGGAAAGAAGAACAGGAACGACAGCTTCTGGAAATGGAGCGTGAGGAGGAATCAAAGAGGTTAAGACTGCAGAAAATAACTGAAGAAGCAGAACAAAGAAGGCTTGCGACTGAGTATGAGCAGAGGAAGAACCAAAGGATCCTTCGGGAAATAGAGGAAAGAGAAAACGAAGAAACTCAAGTTCTACTTCAGGAAGCTGAGAAGCGTATTAAGAAAAAGGGAAAGAAGCCCATTATAGAGGGGGACAAAATGACCAAGCAGACCTTGATGGAATTGACTTTGACTGAACAACTCCGGGAAAGACAGGAAATGGAAAAGAAACTGCAAAAATTAGCTAAAACCATGGATTATTTGGAAAGAGCAAAAAGAGAAGAAGCTGCTCCACTGATTGAAGCTGCATATCAACAGCGCCTTGTAGAAGAGAGGATTCTTCATGAGCGTGAGCAACAACAAGAGGTTGAACTGAGCAAACAGCGGCATGAGGGAGATCTTAAGGAGAAGGAGAGGCTTGCTCGTATGATGGGCAATAAAGAGATATATCAAGCGAGAGTTGTCAGTCATCGCCAAGCAGAATTTGACAGATTGCAGAGAGAAAAGGAGGAGAGAATCTCTAGGATTTTACAGTCCAGGAGACAAGAGAGGGATAAAATGAGGAAGTTGAAGTTTTATCTTAAGTTAGAGGAAGAGATACAACAAAAATTGCATGAGGAGGAGGAAGCTCGGAAGCATGAAGAGGCTGAGAGACGGAAGAAGGAAGAGGCTGAACGCTTAGCAAAATTGGCTGAGATAGCTGAAAAGCAGAAGCAAAGAGAGAGGGAACTTGAAGAAAAGGAGAGACAAAGGAGAGAAGCATTGTTGGGCAGATCTGCCGAACCAGCTTTTAAGCCTTCTGAGCCTCCTGCTCGTCCATTGGAATCTGCACCTGCTGCAGCTGCAGCTGCAGCTGCCGCAGCCCCAACCCCAGGGAAATACGTTCCTAAGTTCCGGCGAGATAAAACTGAAAGCACAGCAGCTCCTCCTCCTCCTGAAACAGATCGTTGGAACAGTAGCAGCAGACCGGATGGTGACAGGTGGCGTGGTGATGATCGCAGAGCTCCGTTTGGTTCTGGTGGGGGTTCAAGGTCATCTTCCACTTGGTCATCTTCCAGGAATCGTGATCGTTGA 2883 0.4353 MTSFLKPENALKRAEELINVGQKQDALQTLHDLITSKRYRAWQKTLERIMFKYVELCVDMRKGRFAKDGLIQYRIICQQVNVSSLEEVIKHFMHLSTEKAEQARSQAQALEEALDVDDLEADKRPEDLMLSYVSGEKGKDRSDRELVTPWFKFLWETYRTVLEILRNNSKLEALYAMTAHRAFQFCKQYKRTTEFRRLCEIIRNHLANLNKYRDQRDRPDLSAPESLQLYLDTRFEQLKVATELELWQEAFRSVEDIHGLMCMVKKTPKPSLMVVYYVKLTEIFWISSSHLYHAYAWFRLFLLQKSFNKNLSQKDLQLIASSVVLAALSVPPHDRTHGASHLELEHEKERNLRMANLIGFNLETKPESREVLSRSSLLAELASKGVMSCVTQEVKDIYYLLEHEFLPSDLALKVLPLLTKISKLGGKLSTASSVPEVQLAQYVPALEKLATLRLLQQVSNVYQTMKIETLSGMIPFFDFSVVEKISVDAVKQKFVSMKVDHMKNVVIFCKMSLESDGLRDHLANFAEQLNKARQMIHPPDGKPSKLGALLPTLTEVVAKEHKRLLARKSIIEKRKEEQERQLLEMEREEESKRLRLQKITEEAEQRRLATEYEQRKNQRILREIEERENEETQVLLQEAEKRIKKKGKKPIIEGDKMTKQTLMELTLTEQLRERQEMEKKLQKLAKTMDYLERAKREEAAPLIEAAYQQRLVEERILHEREQQQEVELSKQRHEGDLKEKERLARMMGNKEIYQARVVSHRQAEFDRLQREKEERISRILQSRRQERDKMRKLKFYLKLEEEIQQKLHEEEEARKHEEAERRKKEEAERLAKLAEIAEKQKQRERELEEKERQRREALLGRSAEPAFKPSEPPARPLESAPAAAAAAAAAAPTPGKYVPKFRRDKTESTAAPPPPETDRWNSSSRPDGDRWRGDDRRAPFGSGGGSRSSSTWSSSRNRDR* 961
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g03204 960 ProSiteProfiles PCI domain profile. 316 513 IPR000717 -
Rops8g03204 960 MobiDBLite consensus disorder prediction 833 960 - -
Rops8g03204 960 FunFam Eukaryotic translation initiation factor 3 subunit A 352 494 - -
Rops8g03204 960 MobiDBLite consensus disorder prediction 833 861 - -
Rops8g03204 960 Gene3D - 269 342 - -
Rops8g03204 960 Gene3D - 352 510 - -
Rops8g03204 960 FunFam Eukaryotic translation initiation factor 3 subunit A 217 268 - -
Rops8g03204 960 FunFam Eukaryotic translation initiation factor 3 subunit A 268 342 - -
Rops8g03204 960 SMART motif in proteasome subunits, Int-6, Nip-1 and TRIP-15 441 532 IPR000717 -
Rops8g03204 960 Pfam PCI domain 373 508 IPR000717 -
Rops8g03204 960 MobiDBLite consensus disorder prediction 922 937 - -
Rops8g03204 960 Coils Coil 561 602 - -
Rops8g03204 960 Hamap Eukaryotic translation initiation factor 3 subunit A [EIF3A]. 1 959 IPR027512 GO:0005852
Rops8g03204 960 Coils Coil 793 857 - -
Rops8g03204 960 Coils Coil 667 697 - -
Rops8g03204 960 Coils Coil 93 120 - -
Rops8g03204 960 Coils Coil 622 649 - -
Rops8g03204 960 Gene3D UVR domain 217 268 - -
Rops8g03204 960 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3, THETA SUBUNIT 1 950 IPR027512 GO:0005852
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g03204 1 958 Eukaryotic Initiation Factors Gene Family AT4G11420 73.542 0.0 1323
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g03204 K03254 - gmx:100782598 1508.04