Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g03201 ATGGCGGCGTCACGGCGGCTCCGGGATCTTCAATCGGAAGCATCAAACAAGATCTGCGTGGACTGTTCCCAGAAGAATCCACAATGGGCCTCCGTTTCCTACGGAGTGTTCATGTGTCTCGAATGCTCTGGCAAGCACCGTGGTCTCGGTGTTCACATCTCCTTCGTCCGATCCGTTACCATGGATTCATGGTCGGACCTTCAGATCAAGAAAATGGAAGCTGGAGGTAATAACAAACTCAACGTTTTTCTCGCACAGTACGGTATCCCTAAGGAAACTGACATCATTGCTAAGTATAATTCCAACGCTGCCGCCGTTTACCGTGATCGGATTCAGGCCATCGCCGAAAGTCGTCCATGGCGGGATCCACCGGTTGTTAAGGAGAATGTCCGTTCCGGCGCCGGGAAGGGGAAGCCGCCGTTGCCTGCTTCTTCCAACGGAGGGTGGGATGATTGGGATAATGATGACAGTGGTTTTGGATCTCGCGGTGATATACGGCGGAATCAGTCCACCGGCGATGTTAGGGGGTTCGGTGGAGGCGGAACCGTGCCGTCGAGGTCGAAGTCGACGGAGGATATATACACGCGGTCGCAATTGGAGGCTTCTGCTGCTAATAAGGAAAGCTTCTTCTCTCGGAGGATGGCGGAGAATGAATCGCGACCGGAGGGGCTTCCGCCGTCGCAGGGTGGCAAGTACGTCGGATTCGGATCTAGCCCCCCTCCGGTGAACAGGAGTAATCCCGAGAACGACTATTTATCTGTCGTTTCACAGGGATTTGGTAGATTATCCTTCGCTGCTGCCTCTGCGGCTAATGTTGTTCAGGCAGGCACGAAAGAATTCACTTCTAAGGTAAAGGATGGTGGTTATGATTACAAGGTCAATGAAACTGTCAATATTGTCTCTCAGAAGACATCAGAGATTGGACAAAAGACATGGGGTATCATGAGAGGTGTCATGGCATTGGCTTCACAGAAGGTTGAGGAGTACACTAGAGATGGCCCAACTGGGAACTCTGATAACTGGCAACGAAATGAAAATGATAGAAATGGTTTTTATCGTGAGTTCAATCAAGAGAATAAAGGTTGGAATTCTTCTAGCCGAGAAAGACAACCTTCATCAGGAGGACAAACTGATACGTTTCACTCAAGTTCTTGGGATGATTGGGACCACAAAGATTCCAGAAAGGAAGAACCGGCCAGAGGATCAGCTCCTTACTCATCAAGTGGCCAGTTTGATACTTACAACTCAAGCTCTTGGGATGATTGGGACCACAAAGATACAAGGAAGGAAGAACCTGCTAAAGGTTCATCTCCCCATAACGATGATGGTTGGGCTGGCTGGGATAATACCAAAGATGATGGATTTGATAATAAAGCTTTTGGTCATAATGGGACGTCAGGTTCTGCCTGGACAGGAGGAGGTTTTCTCTAA 1431 0.4941 MAASRRLRDLQSEASNKICVDCSQKNPQWASVSYGVFMCLECSGKHRGLGVHISFVRSVTMDSWSDLQIKKMEAGGNNKLNVFLAQYGIPKETDIIAKYNSNAAAVYRDRIQAIAESRPWRDPPVVKENVRSGAGKGKPPLPASSNGGWDDWDNDDSGFGSRGDIRRNQSTGDVRGFGGGGTVPSRSKSTEDIYTRSQLEASAANKESFFSRRMAENESRPEGLPPSQGGKYVGFGSSPPPVNRSNPENDYLSVVSQGFGRLSFAAASAANVVQAGTKEFTSKVKDGGYDYKVNETVNIVSQKTSEIGQKTWGIMRGVMALASQKVEEYTRDGPTGNSDNWQRNENDRNGFYREFNQENKGWNSSSRERQPSSGGQTDTFHSSSWDDWDHKDSRKEEPARGSAPYSSSGQFDTYNSSSWDDWDHKDTRKEEPAKGSSPHNDDGWAGWDNTKDDGFDNKAFGHNGTSGSAWTGGGFL* 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g03201 476 MobiDBLite consensus disorder prediction 183 200 - -
Rops8g03201 476 MobiDBLite consensus disorder prediction 122 200 - -
Rops8g03201 476 Gene3D Arf GTPase activating protein 1 129 IPR038508 -
Rops8g03201 476 SMART arf_gap_3 1 120 IPR001164 GO:0005096
Rops8g03201 476 MobiDBLite consensus disorder prediction 383 399 - -
Rops8g03201 476 MobiDBLite consensus disorder prediction 403 417 - -
Rops8g03201 476 MobiDBLite consensus disorder prediction 213 244 - -
Rops8g03201 476 MobiDBLite consensus disorder prediction 328 347 - -
Rops8g03201 476 PANTHER ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN AGD6-RELATED 1 399 IPR044519 GO:0005096|GO:0016192
Rops8g03201 476 CDD ArfGap_ArfGap1 3 116 - -
Rops8g03201 476 ProSiteProfiles ARF GTPase-activating proteins domain profile. 4 120 IPR001164 GO:0005096
Rops8g03201 476 MobiDBLite consensus disorder prediction 330 345 - -
Rops8g03201 476 SUPERFAMILY ArfGap/RecO-like zinc finger 5 113 IPR037278 -
Rops8g03201 476 FunFam ADP-ribosylation factor GTPase-activating protein 1 129 - -
Rops8g03201 476 PRINTS HIV Rev interacting protein signature 16 35 IPR001164 GO:0005096
Rops8g03201 476 PRINTS HIV Rev interacting protein signature 35 52 IPR001164 GO:0005096
Rops8g03201 476 PRINTS HIV Rev interacting protein signature 56 77 IPR001164 GO:0005096
Rops8g03201 476 MobiDBLite consensus disorder prediction 358 476 - -
Rops8g03201 476 MobiDBLite consensus disorder prediction 358 382 - -
Rops8g03201 476 Pfam Putative GTPase activating protein for Arf 5 109 IPR001164 GO:0005096
Rops8g03201 476 MobiDBLite consensus disorder prediction 418 437 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g03201 Rops-Chr8 70229584 70235049 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g03201 5 81 C2H2 Transcription Factor Family AT4G21160 52.564 7.12e-22 94.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g03201 K12492 - gmx:100778302 757.673
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops8g03201 8 70229584 70235049 Rops8g03201 8 70229584 70235049 ECH