Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g03200 ATGATGGTCAACACGAGCACCATCAGAACATCTTCCGATGGAGCCTGGCAGGGCGATGATCCTTTGAACCACGCTCTTCCATTGTTGATCATTCAAACCACCCTAGTCGTCTTTGTCAGCCGCACCCTCGCCTTCTTCCTCAAACCCCTTCGTCAACCCAAAGTTGTTGCTGAGATTATTGAGTTGGATGAGGTGGCAATAAACGAGTTCAAAACTAAATGGCTTGGGTCAGTCGAGTACATTGAAAAGGAAGCAGTCAACATAACAGAGGAGGTGTTAACAATTGGGAAGGCTAAGGTGTACGAGTTAGTGATTGTGGGGAAGGGACAACAGCTTCTTGAGCAAAACGTGTTGACAAACATACAAGATTCTCGTCTCGAACATGCTGAGCTGGGGCCTATTGGAGATCTGTTAGCTTCTTCAGGTCAGGGAATTACGAGTTCAGTGCTCGTTATACAGGATCAACATTTAATAAATTCAAACGAAACTACACTCAGAATGACAGAAAGGGCCACGAGTACCGGGATTAATGCTGTGTCAGAAGTTGGATCATCGGTTTAA 561 0.4545 MMVNTSTIRTSSDGAWQGDDPLNHALPLLIIQTTLVVFVSRTLAFFLKPLRQPKVVAEIIELDEVAINEFKTKWLGSVEYIEKEAVNITEEVLTIGKAKVYELVIVGKGQQLLEQNVLTNIQDSRLEHAELGPIGDLLASSGQGITSSVLVIQDQHLINSNETTLRMTERATSTGINAVSEVGSSV* 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g03200 186 PANTHER CATION/H + ANTIPORTER 62 155 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g03200 Rops-Chr8 70221391 70229012 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g03200 61 182 Antiporter Super Family AT3G53720 40.984 2.46e-22 91.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g03200 K26731 - gmx:100799165 139.813
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops8g03200 8 70221391 70229012 Rops8g03200 8 70221391 70229012 ECH