Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g03198 ATGAACGCTTCTCATGGTGTTGAACGGATTCCAACTCCTAAGCCACCAGTCAACAAAACCATGATACAGAAACTCCTCAAGGAAGCTTCTGAATCTTCTCAGTTGCAGATCCAATGCCTCCAAAGACTCAAATCTATCGCTTCTGAGAGTGAGACAAATAGGCAGCGCATGGAAGCTTCTGGTGCTGTTGAGTTCTTAGCATCAGTTGTAACCAACAACACCAAAGCTTCACTTTCCGCAGATGATGATGATATTGATGGGTTTGACTTGAAAATAGGGACCAAAGTGACGGTTTTCCGGCCCTTGGTTACGTGGCAAGCTTGTGGGAACTGTTTTGTGACAACTCAGCCATCCATGTGGCACGTTAAGTGCCACATGGGCTTCTTAAACGGCGTCACTAACAGACCATTGACGGAGGGACTAAAGTGA 429 0.4615 MNASHGVERIPTPKPPVNKTMIQKLLKEASESSQLQIQCLQRLKSIASESETNRQRMEASGAVEFLASVVTNNTKASLSADDDDIDGFDLKIGTKVTVFRPLVTWQACGNCFVTTQPSMWHVKCHMGFLNGVTNRPLTEGLK* 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g03198 142 PANTHER WDSAM1 PROTEIN 1 79 IPR045185 GO:0061630
Rops8g03198 142 Coils Coil 40 60 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g03198 Rops-Chr8 70199011 70199518 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g03198 1 75 U-box Gene Family AT2G35930 49.333 1.82e-22 89.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g03198 - - gmx:100811258 108.227