Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g03186 ATGGAATCTCAAAACAAAAACCAAGTGGCACCTCAAAATGTAGCTACTCAGTTAACAGCACTTGTTGTGGATGATAATGTGGTCAACAGGAAGATTCATCAACAGTTGTTGAACAGTATTGGAGTGAAAAATCAGGGAGTGGAAAATGGCAAAGAAGCAGTGGACATTCATTGGCATGGACAAAGGTTTGACCTAATTCTCATGGACATGGATATGCCTATCATGAATGGCATTGAGGCAACAAAGGAACTTCGCTCAATGGGTGTTAATAGGATGATTGTTGGTGTGTCATCACGGTTTCTCGAAGCGGAAATACAAAAAATTATGGAAGCAGGGATGGATGATTATCAAGAGAAACCCTTAACTATTGCTAAGCTTACTTCAATTATTGATAAGATCAAATCCAATTTTGTTTGTAAGTGA 423 0.383 MESQNKNQVAPQNVATQLTALVVDDNVVNRKIHQQLLNSIGVKNQGVENGKEAVDIHWHGQRFDLILMDMDMPIMNGIEATKELRSMGVNRMIVGVSSRFLEAEIQKIMEAGMDDYQEKPLTIAKLTSIIDKIKSNFVCK* 141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g03186 140 CDD REC_hyHK_CKI1_RcsC-like 21 130 - -
Rops8g03186 140 Gene3D - 1 137 - -
Rops8g03186 140 SMART REC_2 18 130 IPR001789 GO:0000160
Rops8g03186 140 Pfam Response regulator receiver domain 21 130 IPR001789 GO:0000160
Rops8g03186 140 ProSiteProfiles Response regulatory domain profile. 19 134 IPR001789 GO:0000160
Rops8g03186 140 PANTHER TWO-COMPONENT RESPONSE REGULATOR 5 135 - -
Rops8g03186 140 SUPERFAMILY CheY-like 17 133 IPR011006 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g03186 Rops-Chr8 69969019 69969633 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g03186 21 130 Response Regulator Gene Family AT3G04280 47.321 1.26e-27 98.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Rops8g03186 Response_reg 8.5e-22 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g03186 - - gmx:100794931 190.66