Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g03179 ATGGAGAACTTGTTTCGCCTAGTTGATCATGAAGACTTCTTCTCACGCCGTTGCATTTGGGTCAATGGCCCTGTGATTGTAGGTGCAGGCCCTTCTGGTCTAGCCACAGCAGCATGCCTTAGAGAACAAGGGGTACCCTTCATGGTTCTTGAAAGAGCAGATTGCATAGCTTCACTGTGGCAAAAACGTACCTATGATAGGTTGAAGCTTCACCTTCCAAAGCATTATTGCCAATTACCTAAGCTTCCATTCCCTGAAGACTTCCCTGAGTACCCCACAAAGAAACAGTTCATAGAGTACCTTGAATCTTATGCAAAGCATTTTGAGATCAACCCACAATTCAATGAGTGTGTTCAATCTGCTAGATATGATGAAACAAGTGGATTGTGGAGGGTCAAGACCGTTTCTGCTAATGGTTCAACACGCAACGAGGTTGAATACATTTGCAGGTGGCTAGTTGTAGCCACTGGTGAACATGCTGAGTGTGTTATGCCTGATATTGAAGGCTTAGCTGAATTCAAAGGTGATGTTATTCATGCTTGTGATTACAAGTCAGGTGAAAGCTTCAGGGGAAAGAAAGTTCTTGTTGTAGGGAGTGGCAATTCTGGCATGGAGCTTTCACTTGATCTTTGCAACCACCGAGCCTTACCCTCAATGGTTGTTCGAAGTTCGGTTCATGTGTTACCAAGAGAAATCTATGGTAAATCAACGTTTGAGTTGGCCGTTTTGATGCTTAGATGGTTACCCCTTTGGCTTGTTGACAAGCTTCTGTTGATCCTAGCATGGTTAGTTTTGGGTAACATAGAGAAATATGGGCTAAAAAGGCCATCAACTGGTCCATTGGAGCTGAAGAACACAAAAGGAAAAACCCCTGTTTTGGACATTGGTGCCTTGGAGAAAATTAGATCCGGTGACATAAAAGTGGTACCTGGAATCAAGAGGTTTAACAATGATGAAGCTGAGCTTGTTAATGGTGAAAAGCTTGACATTGATGCAGTGGTACTTGCAACTGGATACCGCAGCAATGTCCCTTCTTGGCTTCAGGAAGGTGAATTTTTCTCCAAGAATGGATACCCAAAGATGCCATTCCCTCATGGCTGGAAAGGAAATGCTGGACTTTATGCTGTTGGTTTCACAAAGAGAGGGCTCTCTGGTGCTTCATATGATGCTGTGAAAATTGCTCAAGATATTGGCAAAGTTTGGAAACAAGAGACAAAGCAAAAGAAGCAGCGCACTACAGCTTGTCATAGACGTTGCATTTCCCAGTTTTGA 1272 0.4347 MENLFRLVDHEDFFSRRCIWVNGPVIVGAGPSGLATAACLREQGVPFMVLERADCIASLWQKRTYDRLKLHLPKHYCQLPKLPFPEDFPEYPTKKQFIEYLESYAKHFEINPQFNECVQSARYDETSGLWRVKTVSANGSTRNEVEYICRWLVVATGEHAECVMPDIEGLAEFKGDVIHACDYKSGESFRGKKVLVVGSGNSGMELSLDLCNHRALPSMVVRSSVHVLPREIYGKSTFELAVLMLRWLPLWLVDKLLLILAWLVLGNIEKYGLKRPSTGPLELKNTKGKTPVLDIGALEKIRSGDIKVVPGIKRFNNDEAELVNGEKLDIDAVVLATGYRSNVPSWLQEGEFFSKNGYPKMPFPHGWKGNAGLYAVGFTKRGLSGASYDAVKIAQDIGKVWKQETKQKKQRTTACHRRCISQF* 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g03179 423 Pfam Flavin-binding monooxygenase-like 26 344 IPR020946 GO:0004499|GO:0050660|GO:0050661
Rops8g03179 423 PRINTS Pyridine nucleotide disulphide reductase class-II signature 189 213 - -
Rops8g03179 423 PRINTS Pyridine nucleotide disulphide reductase class-II signature 23 45 - -
Rops8g03179 423 FunFam Flavin-containing monooxygenase 24 406 - -
Rops8g03179 423 SUPERFAMILY FAD/NAD(P)-binding domain 192 399 IPR036188 -
Rops8g03179 423 Gene3D - 24 408 IPR036188 -
Rops8g03179 423 PRINTS FAD-dependent pyridine nucleotide reductase signature 193 211 - -
Rops8g03179 423 PRINTS FAD-dependent pyridine nucleotide reductase signature 24 43 - -
Rops8g03179 423 SUPERFAMILY FAD/NAD(P)-binding domain 25 300 IPR036188 -
Rops8g03179 423 PANTHER FLAVIN-BINDING MONOOXYGENASE-LIKE PROTEIN (AFU_ORTHOLOGUE AFUA_4G09220) 25 417 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g03179 Rops-Chr8 69876690 69878397 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g03179 K11816 - gmx:100819987 770.77
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops8g03179 8 69876690 69878397 Rops8g03179 8 69876690 69878397 ECH
Rops8g03179 8 69876690 69878397 Rops6g00161 6 3977593 3979587 PCT
Rops6g01792 6 35622052 35630299 Rops8g03179 8 69876690 69878397 PCT