Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g03171 ATGATCGCCGCTGGCTGCTTCGCCGGAATTTCGTTAGCTGCGGCGAGGTTTCTGAGCTCGAAGCTTCTTCCCTCTGATGATGCTTTTGGACGGTTTCGTGTTCGGCGAGAGAGAATGCCGGTGTCGGTTATCTTCCTGCTTGCTCTTCTTAACTTGCTTTTCTCTTGCCAAGTGAAGTCATTTTCTCTGAGTGTGTCATTTGCTTCATCGGGACAAGCTAAATCGTGGTTACTTAAACCTTCTTCTGGACCATCTTCTGCACCTGTGCCGTCTCCATCTTATCAAGGTCCCATTATGGCTCCAAAACCAAAACATCATCATCACCACCGGCACCATCATAGAATGAGACCTTATGTAGTGGCTCCACCCCCTTCTAAAGACCAAGGTTGTGATCAAGTCTGTACGGATCCTCTCACATCAACTCCCTTTGGTTCACCTTGTGGTTGTGTATTTCCAATGAAAGTCAGACTTACACTGGATGTAGCTCCTTATGCTGTTTTTCCAGTAATGACCGAGTTAGAGAATGAAATTGCATTAGGCACATATTTAGAGCAGAGTCAGGTGAAGATAATGGGTGCCAGTGCTGACAGTCAAAATCAGGGAAGAACTGTTGTTGATATTAACTTGGTTCCTCTGGGAGAGAAATTTGACAATACAACTGCAGCTCTGACATATGAGAGGTTCTGGCACAAGAAAGTTCCTCTAAACAGGAGCCTTTTTGGTGATTATGCTGTTGTGTACATTACATATCCAGGAATGCCATCATCGCCACCATATGATTCTTCAATTGAGAGTGGTCCCAGTGAAAGTGCTGATGGTATTCTGCCAGTCAGTGCCAACTTTGCCAGCAAGAACCAGAAAATGAATCTTAGAACCATAATCATCATTGCTTTATCTTCCTTCGTGCTCTTGCTGGTTTTGGTTGGAGCATTTTCTGTCGTTTTGAAATGGAGGAGGACTAGGAGACCATCAAATGCTGTTGGCCCTGCATTCGCATCTTCTCTAAACAAGAGATCAGGCTTGGGGTCTATGTTGTCAAGCAGTATTACAAGCTCGACATCAGTGTCCCTCCTTTCCACAATGGCTACATCCATTCTCTCTGTTAAAACATTTTCACTTTCTGAGCTTGAGAAAGCAACAGATAGGTTTCATTCAAAGAGAGTATTAGGAGAAGGAGGATTTGGACGTGTTTATAGTGCGACATTGGAAGATGGGTCTGAAGTTGCAGTTAAGCTGCTAACAAGGGATAATCAGAATGGAGACCGTGAATTTATTGCTGAAGTTGAGATGCTAAGCCGTTTGCATCATCGTAATCTAGTAAAACTGATTGGTATATGCATTGAAGGGCACAGGCGTTGCCTGGTGTATGAGCTCGTTCCTAATGGCAGTGTCGAGTCCCATCTGCATGGTGATGACAAGAAAAAGGGACCTCTAGATTGGGAAGCACGGATGAAAATTGCCCTAGGAGCTGCAAGAGGATTAGCCTATCTCCATGAGGATTCTAATCCTCGTGTAATTCATCGAGATTTTAAAGCTAGCAATGTGTTACTAGAAGATGACTTTACCCCGAAAGTTTCTGATTTTGGCTTGGCAAGAGAAGCAACCGAAGGAAGTAATCATATTTCAACACGGGTGATGGGAACTTTCGGGTATGTTGCCCCAGAATATGCAATGACAGGCCATTTACTGGTTAAAAGTGATGTTTATAGTTATGGTGTCGTGCTGCTTGAACTTCTAACAGGTAGAAAGCCAGTGGATATGTCTCAACCTCAGGGACAGGAGAATCTTGTCACTTGGGCACGGCCACTGTTGACGAGTAGGGAAGGTTTGGAACAGCTAGTGGATCCATCTTTGGCTGGAAGTTACAACTTTGACGACATGGCAAAGGTTGCTGCTATTGCTTCAATGTGTGTTCATCCTGAGGTCACACAGAGACCTTTTATGGGTGAAGTTGTGCAGGCTCTTAAGTTGATATACAATGACACAGACGAGGCTGGTGGAGATTGTTGTAGTCAGAAGGACTCCTCTGCTCAGGAGTCTGATTTTAGAGGTGACCTTGCCCCTTCTGATAGCAGTTGGTGGAATGCTGGAGGGTTAACCCCTCGATTAACTTATGGACAAGCATCTTCCTTCATCACAATGGAGTACAGTTCTGGTCCTCTTGATGAAATGGAAAACAGACCGTTTTCAACTTCAAGCTTGATTGGAGATGAGATATCTTTACCTATTAGGCATGGAAATAGATCCGGTCCCTTAAGAACAGTCCGAAGCAAGCTATCCTTATATAGATTTACAGGAAGTAGGAGTGAACATGGGGGACTTTCTTCCAAGCGTAATCGGAATGATGGTTACTGGGTTTGA 2361 0.443 MIAAGCFAGISLAAARFLSSKLLPSDDAFGRFRVRRERMPVSVIFLLALLNLLFSCQVKSFSLSVSFASSGQAKSWLLKPSSGPSSAPVPSPSYQGPIMAPKPKHHHHHRHHHRMRPYVVAPPPSKDQGCDQVCTDPLTSTPFGSPCGCVFPMKVRLTLDVAPYAVFPVMTELENEIALGTYLEQSQVKIMGASADSQNQGRTVVDINLVPLGEKFDNTTAALTYERFWHKKVPLNRSLFGDYAVVYITYPGMPSSPPYDSSIESGPSESADGILPVSANFASKNQKMNLRTIIIIALSSFVLLLVLVGAFSVVLKWRRTRRPSNAVGPAFASSLNKRSGLGSMLSSSITSSTSVSLLSTMATSILSVKTFSLSELEKATDRFHSKRVLGEGGFGRVYSATLEDGSEVAVKLLTRDNQNGDREFIAEVEMLSRLHHRNLVKLIGICIEGHRRCLVYELVPNGSVESHLHGDDKKKGPLDWEARMKIALGAARGLAYLHEDSNPRVIHRDFKASNVLLEDDFTPKVSDFGLAREATEGSNHISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDMSQPQGQENLVTWARPLLTSREGLEQLVDPSLAGSYNFDDMAKVAAIASMCVHPEVTQRPFMGEVVQALKLIYNDTDEAGGDCCSQKDSSAQESDFRGDLAPSDSSWWNAGGLTPRLTYGQASSFITMEYSSGPLDEMENRPFSTSSLIGDEISLPIRHGNRSGPLRTVRSKLSLYRFTGSRSEHGGLSSKRNRNDGYWV* 787
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g03171 786 ProSitePatterns Serine/Threonine protein kinases active-site signature. 505 517 IPR008271 GO:0004672|GO:0006468
Rops8g03171 786 PANTHER OS01G0750732 PROTEIN 123 675 - -
Rops8g03171 786 CDD STKc_IRAK 389 658 - -
Rops8g03171 786 ProSitePatterns Protein kinases ATP-binding region signature. 389 411 IPR017441 GO:0005524
Rops8g03171 786 MobiDBLite consensus disorder prediction 767 786 - -
Rops8g03171 786 FunFam Receptor-like serine/threonine-protein kinase ALE2 459 677 - -
Rops8g03171 786 SUPERFAMILY Protein kinase-like (PK-like) 362 658 IPR011009 -
Rops8g03171 786 Gene3D Phosphorylase Kinase; domain 1 355 458 - -
Rops8g03171 786 MobiDBLite consensus disorder prediction 84 112 - -
Rops8g03171 786 FunFam receptor-like serine/threonine-protein kinase ALE2 356 458 - -
Rops8g03171 786 Gene3D Transferase(Phosphotransferase) domain 1 459 679 - -
Rops8g03171 786 ProSiteProfiles Protein kinase domain profile. 383 658 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops8g03171 786 Pfam Protein tyrosine and serine/threonine kinase 385 655 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g03171 Rops-Chr8 69772967 69779148 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g03171 133 772 Receptor kinase-like Gene Family AT5G56890 54.518 0.0 649
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Extensin Rops8g03171 PK_Tyr_Ser-Thr 3.8e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g03171 - - gmx:100792309 1313.52