Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g03163 ATGGAGGGCCAAGACAAAGGCAAAGAAAAGGAGGAGGAAAAGTCAGAAACTCAATCAACAGCACTTGTTGTAGAAGGCAAAGAACAGGAGGAGATAAAGTCAGAGACTCAAACAACAGCACTTGTTGTAGAAGGCAAAGAACAGGAGGAGATAATGTTAGAAACCCAATTAACAGCACTTGTTGTAGATGACGATAAGATTGTCCGAAATATTCATAAAGGGCTGTTAAACAAAGCTGGAGTGAAAAGTCATGCAGTGAAGAATGGTCAAGAAGCAGTAGACATTCATTGTAATGGTGAAAGTTTTGACCTGATTCTCATGGATAAGAATATGCCTGTAATGAATGGAATTGAGGCAACAAAGAAACTTCGGTCAATGGGCATTCGTAGCTTCATTGTTGGTGCGGCAACATGTTCTACAGATGAGGAGATAGCTTACTTTCTTGAAGCGGGCTTAGACGATTACCAAGCTAAACCCTTGACCAATGAAACACTTAATGAAGTTCTTGATCAGCTCAAATGA 522 0.4023 MEGQDKGKEKEEEKSETQSTALVVEGKEQEEIKSETQTTALVVEGKEQEEIMLETQLTALVVDDDKIVRNIHKGLLNKAGVKSHAVKNGQEAVDIHCNGESFDLILMDKNMPVMNGIEATKKLRSMGIRSFIVGAATCSTDEEIAYFLEAGLDDYQAKPLTNETLNEVLDQLK* 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g03163 173 MobiDBLite consensus disorder prediction 1 36 - -
Rops8g03163 173 Pfam Response regulator receiver domain 60 169 IPR001789 GO:0000160
Rops8g03163 173 PANTHER TWO-COMPONENT RESPONSE REGULATOR 49 171 - -
Rops8g03163 173 SUPERFAMILY CheY-like 57 171 IPR011006 -
Rops8g03163 173 MobiDBLite consensus disorder prediction 1 18 - -
Rops8g03163 173 Gene3D - 2 173 - -
Rops8g03163 173 CDD REC_hyHK_CKI1_RcsC-like 60 169 - -
Rops8g03163 173 ProSiteProfiles Response regulatory domain profile. 58 173 IPR001789 GO:0000160
Rops8g03163 173 SMART REC_2 57 169 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g03163 Rops-Chr8 69662161 69662538 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g03163 57 172 Response Regulator Gene Family AT3G04280 44.068 2.18e-26 96.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Rops8g03163 Response_reg 1.2e-19 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g03163 - - cam:101506170 156.762