Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g03161 ATGGAAGGCCAAGACAAAGACAAAGAAAAGGAGGAGGAAAAGTCAGAAACCCAATCAACAGCACTTGTTGTAGAAGGCCAAGACAAAGGCAAAGAACAGGAGGAGGTAAAGTTAGAGACTCAATCAACAGAACTTGTTGTAGAAGGCCAAGACAATAGCAAAGAACAGGAGGAGATAGAGTTAGAAACCCAATTAACTGCACTTGTTGTAGATGACGATAAGATTGTCAGAAAGATTCATAAAGGGCTGTTAAACAAAGCTGGAGTGAAAAGTCATGCAGTGAAAAATGGTCAAGAAGCCATAGACATTCATTGTGACGGTGAAAGTTTTGACCTGATTCTCATGGATAAGAATATGCCTGTAATGAATGGAATTGAGGCAACAAAGAAACTTCGGTCTATGGGCATTCGTAGCTTGATTGTTGGTGCATCAACATGCTCCACGGATGAGGAGATAGCTCAATTTGTGGAAGCAGGTTTAGACGACTACCAAGAGAAACCCTTGACCAATGAAACACTTAATGAAGTTCTTAATCAGCTCAAGTGA 546 0.4066 MEGQDKDKEKEEEKSETQSTALVVEGQDKGKEQEEVKLETQSTELVVEGQDNSKEQEEIELETQLTALVVDDDKIVRKIHKGLLNKAGVKSHAVKNGQEAIDIHCDGESFDLILMDKNMPVMNGIEATKKLRSMGIRSLIVGASTCSTDEEIAQFVEAGLDDYQEKPLTNETLNEVLNQLK* 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g03161 181 SUPERFAMILY CheY-like 64 180 IPR011006 -
Rops8g03161 181 ProSiteProfiles Response regulatory domain profile. 66 181 IPR001789 GO:0000160
Rops8g03161 181 MobiDBLite consensus disorder prediction 27 41 - -
Rops8g03161 181 MobiDBLite consensus disorder prediction 1 54 - -
Rops8g03161 181 Gene3D - 43 181 - -
Rops8g03161 181 SMART REC_2 65 177 IPR001789 GO:0000160
Rops8g03161 181 MobiDBLite consensus disorder prediction 1 18 - -
Rops8g03161 181 PANTHER TWO-COMPONENT RESPONSE REGULATOR 52 180 - -
Rops8g03161 181 CDD REC_hyHK_CKI1_RcsC-like 68 177 - -
Rops8g03161 181 Pfam Response regulator receiver domain 68 177 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g03161 Rops-Chr8 69626797 69627506 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g03161 65 180 Response Regulator Gene Family AT3G04280 44.915 1.81e-28 101
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Rops8g03161 Response_reg 1.6e-20 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g03161 - - cam:101506170 157.532