Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g03151 ATGGAGAAGAACAGCATGCAAATGAAAACTCAGTTTTTCATCTTCTTCTTCTGTTACCTTGGTTGTTTCTCTTACGGTTTTGCTGCTGCAGAAAATGATGAAGTATCAGCTTTGCTTTCTATAAAAGCAGGTTTCATTGATCCATTGAACACCCTGAAGGATTGGAAATTGGTGGACAAAGCACCAGGAAATGATGCAGCTCAATGTTACTGGACTGGTGTCATATGCAACTCAGCTGGAGCTGTAGAGAAGCTTGATCTCTCCCACAAGAATCTCAGTGGAAGAATATCCAATGATATACAAAGACTTAAAAGTCTTACTTCTCTCAACTTGTGTTGCAATGCGTTTTCATTAACATTGCCAAAATCCATAGCCAATCTCACCACACTGAACAGTCTTGATGTAAGCCAGAATTTCTTCAAGGGTGACTTTCCATTAGGCCTTGGAAGGGCATGGCGACTTATGGCCTTAAATGCATCCAGCAATGAGTTCACAGGTTCTCTTCCTTGGGACCTTGGAAATGCCTCTTCCTTAGAGATGCTAGATCTTAGAGGCAGTTTCTTTGGAGGGTCAATTCCAAAATCATTCAGTAACTTGCATAAGTTGAAGTTCCTTGGTCTATCTGGGAATAATCTCACTGGGGAAATTCCTGGAGAGCTGGGACAACTTTCATCACTGGAGTCTACGATCCTTGGATATAATGAATTTGAAGGTGGGATTCCAACAGAGTTTGGAAATCTCACCAGTCTTAAGTATCTTGATTTAGCAGTAGCCAATCTTAGGGGTGAGATTCCAGTTGGATTGGGAAGGCTCAAGTTATTGAATACAGTTTTCTTATACAACAACAATTTTGAAGGCAGAATTCTACCAGCAATTGGCAACATGACTTCTTTGCAGTTGCTGGATCTTTCTGATAACATGTTGTCAGGAAAAATTCCAGCGGAAATAAGTCTGCTGAAGAATTTAAAGCTTCTGAACTTCATGGGCAACCAGCTATCTGGTCCTGTGCCTTCTGGCCTTGGAGATTTACCTCAACTTGAGGTGCTTGAGCTATGGAATAATTCCTTGTCAGGGCCATTGCCTAGTAACCTTGGCAAGAATTCACCATTGCAATGGTTGGATGCATCGTCCAATTCACTCTCTGGAGAGATTCCAGAAACTCTTTGCACCCAAGGCAATCTCACCAAGCTTATACTTTTCAATAATGCCTTCTCTGGTCCAATTCCATCAAGCCTATCAGTGTGTCCTTCACTTGTTCGTGTTCGAATTCACAACAATTTTCTTTCTGGGACAATTCCTCTTGGTCTTGGCAAGCTTGAGAAGCTTCAAAGGTTAGAATTGGCTAACAATAGTCTCTCTGGTGGAATTCCTGATGACATTGCTTCTTCCACATCCCTTTCTTTCATTGATCTCTCAAGAAACAAACTCCATTCTTCTCTTCCTTCCACCATTATTTCCATTCCAAACCTGCAAGCTTTCATGGTCTCCAACAACAACTTGGAAGGTGAAATCCCAGACCAATTTCAGGACTGTCCCTCACTTACTGTTCTTGATCTCTCATCAAATCATTTATCTGGAAGCATTCCAGCAAGCATTGCTTCATGTGAGAAATTGGTAAATTTGAACCTACAAAATAACCAATTGACTGGTGAAATCCCAAAAGCATTAGCTAACATGCCTACATTAGCCATTCTTGATCTTTCCAACAATTCTCTCACTGGTCATATACCTGAAAGCTTTGGTGTTACTCCAGCTCTGGAAGCATTCAATGTCTCATACAATAAGCTCGAAGGTTCTGTCCCATCAAATGGTATGCTAAGAACCATAAACCCCAATAATCTTGTTGGCAATGCTGGCCTATGTGGTGGTGTCCTCCTTCCATGTGACCAAAATTCTGCATACTCATCAAGGCATGGAAACTCACATGAAAAGCATATTATTACAGGATGGATCATAGGAATATCATCAATCCTAGTCATTGGGATTGCAATTTTGGTAGCAAGATCTTTCTACATAAGGTGGTACACTGATGGATTTTGCTTCCGAGAAAGATTTTATAAGGGTAGCAAAGGGTGGCCTTGGAGATTGATGGCTTTTCAGAGGCTTGATTTTACAAGTACTGACATTCTAGCTTGCATCAAGGAAACGAATGTGATTGGCATGGGAGCTACTGGGGTTGTTTACAAGGCTGAGGTACCACAGTCAAATACAATTGTGGCAGTGAAAAAATTGTGGAGATCAGGAACTGATATTGAAGTAGGAAGCAGTAATGACCTTGTTGGAGAGGTGAACCTTTTAGGGAGGCTAAGGCATAGGAACATTGTTAGACTACTAGGATTTATTCATAATGACACTGATGTGATGATAGTTTATGAATTTATGCACAATGGCAACCTTGGAGATGCATTGCATGGTAGACAAGCAGCAAGGTTGCTTGTAGACTGGGTTTCAAGGTATAACATAGCTCTAGGAGTAGCACAAGGACTTGCTTATCTTCATCATGATTGTCATCCACCCGTTATCCATAGAGACATCAAGTCAAACAATATCTTGCTTGATGCAAATCTTGAGGCAAGGATAGCAGATTTTGGTTTAGCCAAGATGATGATCCGGAAGAATGAAACAGTCTCCATGGTTGCTGGATCTTATGGCTACATTGCCCCTGAATATGGATATGCCTTGAAGGTGGATGAAAAGATTGATGTTTACAGCTATGGAGTAGTTTTGTTGGAGCTTCTCACAGGAAAGAGGCCTTTAGATCATGACTTTGGAGAGTCTATAGACATAGTAGAGTGGATAAGAAGGAAGATTAGAGACAAGAAATCTCTAGAAGCAGCATTAGACCCAAGTGTAGGAAACTGCAGTCATGTTCTAGAAGAGATGGTTTTAGTTCTAAGAATAGCACTAATTTGCACTGCCAAGCTTCCCAAAGACAGACCAACCATGAGGGATGTCATAATGATGCTTGAAGAGGCAAAACCTAGGAGAAAGAGCAGTGGCAACAATGTAACAGTTGCAGCTAACTACAAAGAGATGCCAGTTTTTAGCACGTCACCAGTTAATGGCCTTCTGTAG 3075 0.4117 MEKNSMQMKTQFFIFFFCYLGCFSYGFAAAENDEVSALLSIKAGFIDPLNTLKDWKLVDKAPGNDAAQCYWTGVICNSAGAVEKLDLSHKNLSGRISNDIQRLKSLTSLNLCCNAFSLTLPKSIANLTTLNSLDVSQNFFKGDFPLGLGRAWRLMALNASSNEFTGSLPWDLGNASSLEMLDLRGSFFGGSIPKSFSNLHKLKFLGLSGNNLTGEIPGELGQLSSLESTILGYNEFEGGIPTEFGNLTSLKYLDLAVANLRGEIPVGLGRLKLLNTVFLYNNNFEGRILPAIGNMTSLQLLDLSDNMLSGKIPAEISLLKNLKLLNFMGNQLSGPVPSGLGDLPQLEVLELWNNSLSGPLPSNLGKNSPLQWLDASSNSLSGEIPETLCTQGNLTKLILFNNAFSGPIPSSLSVCPSLVRVRIHNNFLSGTIPLGLGKLEKLQRLELANNSLSGGIPDDIASSTSLSFIDLSRNKLHSSLPSTIISIPNLQAFMVSNNNLEGEIPDQFQDCPSLTVLDLSSNHLSGSIPASIASCEKLVNLNLQNNQLTGEIPKALANMPTLAILDLSNNSLTGHIPESFGVTPALEAFNVSYNKLEGSVPSNGMLRTINPNNLVGNAGLCGGVLLPCDQNSAYSSRHGNSHEKHIITGWIIGISSILVIGIAILVARSFYIRWYTDGFCFRERFYKGSKGWPWRLMAFQRLDFTSTDILACIKETNVIGMGATGVVYKAEVPQSNTIVAVKKLWRSGTDIEVGSSNDLVGEVNLLGRLRHRNIVRLLGFIHNDTDVMIVYEFMHNGNLGDALHGRQAARLLVDWVSRYNIALGVAQGLAYLHHDCHPPVIHRDIKSNNILLDANLEARIADFGLAKMMIRKNETVSMVAGSYGYIAPEYGYALKVDEKIDVYSYGVVLLELLTGKRPLDHDFGESIDIVEWIRRKIRDKKSLEAALDPSVGNCSHVLEEMVLVLRIALICTAKLPKDRPTMRDVIMMLEEAKPRRKSSGNNVTVAANYKEMPVFSTSPVNGLL* 1025
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g03151 1024 FunFam Leucine-rich repeat receptor-like protein kinase PXL1 187 287 - -
Rops8g03151 1024 Gene3D Transferase(Phosphotransferase) domain 1 798 1012 - -
Rops8g03151 1024 ProSitePatterns Serine/Threonine protein kinases active-site signature. 840 852 IPR008271 GO:0004672|GO:0006468
Rops8g03151 1024 ProSitePatterns Protein kinases ATP-binding region signature. 719 743 IPR017441 GO:0005524
Rops8g03151 1024 SMART LRR_typ_2 343 367 IPR003591 -
Rops8g03151 1024 SMART LRR_typ_2 247 271 IPR003591 -
Rops8g03151 1024 SMART LRR_typ_2 103 127 IPR003591 -
Rops8g03151 1024 SMART LRR_typ_2 295 319 IPR003591 -
Rops8g03151 1024 SMART LRR_typ_2 439 463 IPR003591 -
Rops8g03151 1024 SMART LRR_typ_2 199 223 IPR003591 -
Rops8g03151 1024 SMART LRR_typ_2 487 510 IPR003591 -
Rops8g03151 1024 SMART LRR_typ_2 559 582 IPR003591 -
Rops8g03151 1024 SMART LRR_typ_2 511 535 IPR003591 -
Rops8g03151 1024 SUPERFAMILY Protein kinase-like (PK-like) 709 990 IPR011009 -
Rops8g03151 1024 SUPERFAMILY L domain-like 67 314 - -
Rops8g03151 1024 SMART serkin_6 713 989 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops8g03151 1024 Gene3D Ribonuclease Inhibitor 152 243 IPR032675 -
Rops8g03151 1024 Gene3D Ribonuclease Inhibitor 244 323 IPR032675 -
Rops8g03151 1024 Pfam Leucine rich repeat N-terminal domain 32 77 IPR013210 -
Rops8g03151 1024 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 249 989 - -
Rops8g03151 1024 SUPERFAMILY RNI-like 231 582 - -
Rops8g03151 1024 FunFam MDIS1-interacting receptor like kinase 1 798 1008 - -
Rops8g03151 1024 Gene3D Ribonuclease Inhibitor 33 151 IPR032675 -
Rops8g03151 1024 Gene3D Phosphorylase Kinase; domain 1 713 797 - -
Rops8g03151 1024 FunFam MDIS1-interacting receptor like kinase 1 713 797 - -
Rops8g03151 1024 FunFam Leucine-rich repeat receptor-like protein kinase PXL1 373 632 - -
Rops8g03151 1024 PRINTS Leucine-rich repeat signature 559 572 - -
Rops8g03151 1024 PRINTS Leucine-rich repeat signature 514 527 - -
Rops8g03151 1024 Pfam Leucine Rich Repeat 563 581 IPR001611 GO:0005515
Rops8g03151 1024 Gene3D Ribonuclease Inhibitor 324 632 IPR032675 -
Rops8g03151 1024 ProSiteProfiles Leucine-rich repeat profile. 297 319 IPR001611 GO:0005515
Rops8g03151 1024 FunFam Leucine-rich repeat receptor protein kinase EMS1 288 372 - -
Rops8g03151 1024 FunFam Leucine-rich repeat receptor-like protein kinase PXL1 31 186 - -
Rops8g03151 1024 Pfam Protein kinase domain 715 985 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops8g03151 1024 ProSiteProfiles Protein kinase domain profile. 713 1015 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops8g03151 1024 Pfam Leucine rich repeat 488 548 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g03151 Rops-Chr8 69402840 69406349 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g03151 6 1024 Receptor kinase-like Gene Family AT1G08590 59.152 0.0 1164
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Rops8g03151 Pkinase 4.3e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g03151 - - gmx:100811284 1767.67