Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Rops8g03138 | ATGACAATTTTTCAAAAGGGTCATGCTCTTCTTTTTCATGTACTAGTTATATCTTTGCTTCCATTGAAAATCACAGCATCACCAAGAACAGAAGCAGAAGCCCTTATCAAATGGAAAAACAGTCTAGCCCCTCCTCTTCCTCCTTCTCTCAACTCATGGTCACTCACCAACCTTGGCAACCTTTGCACTTGGGATGCTGTTGTTTGTGACAACACCAATACAACTGTCTTAGAGATAAACTTGTCTGGTGCCAGTCTCACTGGGACACTCACTGGCTTGGGTTTTGCTTCCCTCCCCAACCTCACACACCTCAACATCAATGACAACAATTTTGGTGGATCAATACCATCAGCAATTGGCAACCTCTCCAAGCTCACTTTCTTGGACTTGGGAAACAACTTTTTTGAAGACACACTGCCTTCTGGGATAGGCCAGCTAAGAGAACTTCAATATCTGAATTTTTACTCGAACAATCTCAATGGTATCATACCCTATCAGCTCACAAATCTCCCCAAGGTAAGGTACCTGGACCTTGGATCAAACTACTTTATATCTCCTCCTGACTGGTCCAAATATTCAGGCATGCCTTCGTTAACTTACCTTGGTTTGGATCTCAATGATTTCACTGCTGAGTTCCCAAGTTTCATATTGGAGTGCCAGAACTTAACATACCTTGATCTCTCTCAGAACAATTGGAAAGGCACAATACCAGAATCCTTGTATAGCAATTTGGGCAGGCTTGAATACCTCAACCTCACCAGCTCTGGACTAGAAGGAAAACTGTCATCCAACTTGTCCTTGCTCTCTAATCTCAAGGAACTTCATATAGGTAATAACATGTTTAGTGGTCCTATTCCCACAGAGATAGGATTGATATTAGGACTTGAAGTTCTTGAATTGAACAATATTTCAGCCCACGGGGAAATTCCTTCTTCCTTAGGCCAACTTAGGGAGCTAAAGTATCTTGATCTCCGTGATAACTTTTTGAACTCTAAAATCCCTTCTGAGCTTGGCCTATGCACAAATCTAACCTTCCTGAGTTTAGCAACAAATAATCTGACTGGTCCCTTGCCTTTGTCATTAGCTAATTTGGCCAAACTATCAGAACTGGGATTATCAGCAAATTCCTTTTCTGGTCAAATTTCTGCTTCACTGATCTCTAATTGGACTGAGTTGATCTCTCTTCAAGTCCAAAACAATCAATTGACAGGAAAGGTTCCTCCACAGATTGGCCTGTTGAAAAAAATTAATTACCTCTTTCTATACCAAAATCAGTTCTCTGGTCCCATTCCAGAAGAGATTGGAAACCTGAAGGAAATGACAGTGTTAGACCTTTCAGGAAACCACTTCTCTGGTCCAATTCCACCAACCATTTGGAATCTGAAAAACATCACTGTCCTTAATCTTTTCTTCAACAAGCTCTCTGGAACCATTCCCAAGGATATTGGAAACTTGACCTCACTGCAAATTTTTGATGTCGACAATAATAACTTGGATGGAGAGTTGCCAGAGACCATTGCTCATCTACCTGCCTTAATGAATTTTTCTGTGTTCACCAATAACTTCTCAGGCAGTATTCCCAGGGATTTTGGAAAGAATAGTCCTTCTTTGACTCATGTCTACCTTTCAAACAACACCTTCTCAGGAGAACTGCCTTCTGACTTGTGCAGTGATCTCAAGCTAGTTGTTTTGGCTGTCAATAACAACAGCTTTTCTGGGCCATTGCCTAAGTCCTTGAGAAATTGTTCATCACTAACAAGAGTAAGGCTTGATGAAAACCAGTTCACTGGAAACATCACAGAAGCATTTGGGGTTCATCCGAATCTTAGTTTTATCTCACTCAGTGGAAATCAGATTGTTGGTGAACTCTCCCCTATGTGGGGTGAATGCATCAGCTTAACTGAGATGGAAATGAGTGGAAACAAACTTTCTGGAAAAATTCCATCTGAGCTGAGTAAGTTGAGTCGATTACAATATCTAAGCTTGCATTCCAATGAATTCTCTGGCAGTATCCCACCTGAAATTGGAAATCTAGGCCTGCTCTACATGTTCAACTTGAGCAAGAACCATTTGTCAGGTGAAATTCCAAAGAGTATTGGCAAATTGGCTCAGCTTAATGATCTTGATTTATCAGATAACAACTTCATTGGAAGCATCCCTAAAGAGATCAGTAATTGCAATCGTTTACTGAGTCTCAATTTAAGCCATAATAATCTATCTGGGGAGATACCTTATGAACTTGGCAATCTGTTCTCACTCCAATACTTGTTGGACCTCAGCGGCAATTCTATTTATGGGGAAATTCCTCAAAACCTTCAAAAGCTAGGATCACTGGAGATTCTCAATGTCTCACACAACCATCTATCTGGGACAATCCCACAATCCTTTTCAAGTATGCTCAGTCTTCAATCTATCGATTTTTCTTACAACCACTTGACTGGTTTGATCCCAACAGGTGGTATTTTCCAGACAGCAACTACTGAAGCTTATGTTGGGAACTCAGGTTTGTGTGGTGAGGTAAAAGGATTAACTTGTGCCAAAATATTGTCCCAAGACAACTCTAGAGGGGTTAATAAAAAAGTTCTTCTTGGTGTTATTATACCTGTTTGCGTGTTACTATTTATTGGAATGATTGGTGTTGGAATCCTACTATTCAGAAGGCAAGCCAAACACCTTGATGAAGAGTACAAAAGCATCGAAAATAATGATCAGTCTATTGGCATGGTTTGGGGAAGAGATGGAAAATTCACATTTTCTGATCTTGTTAAGGCCACAAATGAATTCAATGACATGTACTGCATTGGAAAAGGAGGTTTTGGAAGTGTTTATAGAGCAGGATTACCAACAGGTCAAGTTGTTGCTGTTAAAAGGCTCAATATATCAGACTCCGATGACATTCCAGCAGTGAACCGCCAGAGTTTTATGAATGAGGTAAGAACACTTACAGGAGTGAGGCACCGCAATATAATAAAGCTTTATGGATTCTGTTCTAGGAGGAGACAAATGTTCTTGGTTTATGAATATGTCAACAAAGGAAGTTTGGGAAAAATGCTGTATGGAGAGGAAGGAAAATTGGAGTTAATCTGGGCTACAAGGGTGAAAATTGTGCAGGGAATAGCACATGCACTTTCCTACCTACACAGTGACTGCTCCCCAGCAATTGTGCACCGAGATGTAACATTGAATAACATATTACTGGACTCAGACTTTGTACCCCGTCTTGCAGATTTTGGCACAGCCAAGCTGCTAAGCTCTAACAATTCAACCTGGACCTCAGTTGCTGGATCCTATGGCTACATGGCTCCAGAGCTAGCACAAACTATGAGGGTGACTGACAAGTGTGATGTCTATAGTTTTGGAGTGGTGGCATTAGAGCTAATGATGGGAAAGCACCCTGGAGAACTCTTGACTACACTGTCTTCAAAAAATTCTTTGTCATCAATGGAGGATCAACAGGTGCTTCTGAAGGATGTACTAGACCAACGGCTTCCACCTCCAACTGGCCAGTTAGCTGAAGCAATAGTGTTTACAGTGACAGTAGCTTTGGCATGCACACGTGCGGCTCCAGAATCCAGACCAATGATGCGTTCTGTGGCACAAGAACTATCAGCTAATACGCAGCCTTGTCTTTCCGAGCCACTTGGCATGATAACCATAACCAAGCTTACAGGGTTCCAGAAATAG | 3684 | 0.4131 | MTIFQKGHALLFHVLVISLLPLKITASPRTEAEALIKWKNSLAPPLPPSLNSWSLTNLGNLCTWDAVVCDNTNTTVLEINLSGASLTGTLTGLGFASLPNLTHLNINDNNFGGSIPSAIGNLSKLTFLDLGNNFFEDTLPSGIGQLRELQYLNFYSNNLNGIIPYQLTNLPKVRYLDLGSNYFISPPDWSKYSGMPSLTYLGLDLNDFTAEFPSFILECQNLTYLDLSQNNWKGTIPESLYSNLGRLEYLNLTSSGLEGKLSSNLSLLSNLKELHIGNNMFSGPIPTEIGLILGLEVLELNNISAHGEIPSSLGQLRELKYLDLRDNFLNSKIPSELGLCTNLTFLSLATNNLTGPLPLSLANLAKLSELGLSANSFSGQISASLISNWTELISLQVQNNQLTGKVPPQIGLLKKINYLFLYQNQFSGPIPEEIGNLKEMTVLDLSGNHFSGPIPPTIWNLKNITVLNLFFNKLSGTIPKDIGNLTSLQIFDVDNNNLDGELPETIAHLPALMNFSVFTNNFSGSIPRDFGKNSPSLTHVYLSNNTFSGELPSDLCSDLKLVVLAVNNNSFSGPLPKSLRNCSSLTRVRLDENQFTGNITEAFGVHPNLSFISLSGNQIVGELSPMWGECISLTEMEMSGNKLSGKIPSELSKLSRLQYLSLHSNEFSGSIPPEIGNLGLLYMFNLSKNHLSGEIPKSIGKLAQLNDLDLSDNNFIGSIPKEISNCNRLLSLNLSHNNLSGEIPYELGNLFSLQYLLDLSGNSIYGEIPQNLQKLGSLEILNVSHNHLSGTIPQSFSSMLSLQSIDFSYNHLTGLIPTGGIFQTATTEAYVGNSGLCGEVKGLTCAKILSQDNSRGVNKKVLLGVIIPVCVLLFIGMIGVGILLFRRQAKHLDEEYKSIENNDQSIGMVWGRDGKFTFSDLVKATNEFNDMYCIGKGGFGSVYRAGLPTGQVVAVKRLNISDSDDIPAVNRQSFMNEVRTLTGVRHRNIIKLYGFCSRRRQMFLVYEYVNKGSLGKMLYGEEGKLELIWATRVKIVQGIAHALSYLHSDCSPAIVHRDVTLNNILLDSDFVPRLADFGTAKLLSSNNSTWTSVAGSYGYMAPELAQTMRVTDKCDVYSFGVVALELMMGKHPGELLTTLSSKNSLSSMEDQQVLLKDVLDQRLPPPTGQLAEAIVFTVTVALACTRAAPESRPMMRSVAQELSANTQPCLSEPLGMITITKLTGFQK* | 1228 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Rops8g03138 | 1227 | FunFam | MDIS1-interacting receptor like kinase 2 | 1009 | 1208 | - | - | |
Rops8g03138 | 1227 | Pfam | Leucine rich repeat | 124 | 182 | IPR001611 | GO:0005515 | |
Rops8g03138 | 1227 | ProSitePatterns | Protein kinases ATP-binding region signature. | 934 | 956 | IPR017441 | GO:0005524 | |
Rops8g03138 | 1227 | PANTHER | LEUCINE RICH REPEAT KINASE 2 | 482 | 1206 | - | - | |
Rops8g03138 | 1227 | Pfam | Protein kinase domain | 931 | 1166 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Rops8g03138 | 1227 | FunFam | Leucine-rich repeat receptor-like serine/threonine-protein kinase At1g17230 | 534 | 848 | - | - | |
Rops8g03138 | 1227 | FunFam | Leucine-rich repeat receptor protein kinase MSP1 | 891 | 1008 | - | - | |
Rops8g03138 | 1227 | Gene3D | Transferase(Phosphotransferase) domain 1 | 1009 | 1211 | - | - | |
Rops8g03138 | 1227 | SUPERFAMILY | RNI-like | 520 | 816 | - | - | |
Rops8g03138 | 1227 | ProSiteProfiles | Protein kinase domain profile. | 928 | 1210 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Rops8g03138 | 1227 | SUPERFAMILY | Protein kinase-like (PK-like) | 911 | 1202 | IPR011009 | - | |
Rops8g03138 | 1227 | Pfam | Leucine Rich Repeat | 777 | 798 | IPR001611 | GO:0005515 | |
Rops8g03138 | 1227 | Pfam | Leucine Rich Repeat | 100 | 122 | IPR001611 | GO:0005515 | |
Rops8g03138 | 1227 | FunFam | MDIS1-interacting receptor like kinase 2 isoform A | 404 | 506 | - | - | |
Rops8g03138 | 1227 | Coils | Coil | 882 | 902 | - | - | |
Rops8g03138 | 1227 | Gene3D | Phosphorylase Kinase; domain 1 | 889 | 1008 | - | - | |
Rops8g03138 | 1227 | SUPERFAMILY | RNI-like | 78 | 403 | - | - | |
Rops8g03138 | 1227 | FunFam | MDIS1-interacting receptor like kinase 2 | 193 | 387 | - | - | |
Rops8g03138 | 1227 | Gene3D | Ribonuclease Inhibitor | 28 | 189 | IPR032675 | - | |
Rops8g03138 | 1227 | Pfam | Leucine rich repeat N-terminal domain | 30 | 70 | IPR013210 | - | |
Rops8g03138 | 1227 | SMART | LRR_typ_2 | 122 | 146 | IPR003591 | - | |
Rops8g03138 | 1227 | SMART | LRR_typ_2 | 799 | 824 | IPR003591 | - | |
Rops8g03138 | 1227 | SMART | LRR_typ_2 | 535 | 558 | IPR003591 | - | |
Rops8g03138 | 1227 | SMART | LRR_typ_2 | 702 | 726 | IPR003591 | - | |
Rops8g03138 | 1227 | SMART | LRR_typ_2 | 437 | 461 | IPR003591 | - | |
Rops8g03138 | 1227 | SMART | LRR_typ_2 | 775 | 798 | IPR003591 | - | |
Rops8g03138 | 1227 | SMART | LRR_typ_2 | 195 | 219 | IPR003591 | - | |
Rops8g03138 | 1227 | SMART | LRR_typ_2 | 654 | 678 | IPR003591 | - | |
Rops8g03138 | 1227 | SMART | LRR_typ_2 | 485 | 509 | IPR003591 | - | |
Rops8g03138 | 1227 | SMART | LRR_typ_2 | 98 | 121 | IPR003591 | - | |
Rops8g03138 | 1227 | SMART | LRR_typ_2 | 316 | 340 | IPR003591 | - | |
Rops8g03138 | 1227 | ProSitePatterns | Tyrosine protein kinases specific active-site signature. | 1054 | 1066 | IPR008266 | GO:0004672|GO:0006468 | |
Rops8g03138 | 1227 | SUPERFAMILY | RNI-like | 298 | 621 | - | - | |
Rops8g03138 | 1227 | CDD | STKc_IRAK | 934 | 1202 | - | - | |
Rops8g03138 | 1227 | FunFam | MDIS1-interacting receptor like kinase 2 | 28 | 189 | - | - | |
Rops8g03138 | 1227 | Gene3D | Ribonuclease Inhibitor | 505 | 846 | IPR032675 | - | |
Rops8g03138 | 1227 | Gene3D | Ribonuclease Inhibitor | 190 | 504 | IPR032675 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Rops8g03138 | Rops-Chr8 | 69283792 | 69288252 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Rops8g03138 | 31 | 648 | Receptor kinase-like Gene Family | AT4G08850 | 31.935 | 1.48e-78 | 278 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LRR-XI-1 | Rops8g03138 | Pkinase | 1.2e-45 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Rops8g03138 | - | - | gmx:100809137 | 1906.34 |