Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g03131 ATGCATTTGGGAGAGTGCATAAGCCTTTCAAGTTTTAGCATATCTGCTAATAAGATACAAGGGAATATTCCTCCGGAGCTTGGAAAGTTGCCAAGGTTACAAAATCTTGACCTATCTGAAAACAATCTCACGGGAAATATCCCAGTAGAGCTTTTTAGTTCATCTTCCATGCTACTCAAACTAAATTTGAGTAACAATGATCTCAGGGAAGATACTTGCAAGGATAAGACAATTTTCACAGCTGCAGTATCTGGATTTTTTAGCAAACAATTTGAGTGGTCCAATTCCACACGAGCTAGGAAGTTGCGGGAACTTAATATTCTTGAAACTGATTTTTTGGGGCAAAACCTTCTGGTCTCAAAGGACTTATCATCCTTCAAACAGTTGATGTGTCCTACAAAAAAACTTGAAGGTCCCCTCCCAAATCTAGAAGCTTTTAATAATGCTCCAGCAGAAGCACTGGTGAGTAATGCTGGTCTATGTGCTGGTCCTGATGGAACAAGAGGACAAGGCAGTGTATACAAGGCATTACTTCCAACAGGTGACATCTTTGCAGTAAAACGTCTTCACGAACAAGAAGAAATTGACTTTTCTGCATACAAGACAAAGAATTTCATGTTTGAAATCCATGCATTGACTAATATTCGTCATAGGAATATTATAAAAATGTGTGGCGTCAGTTACTTGGGTCATAGGTCCATGTTTTTCATATATGAGTATGTGGAAAGAGGCTTTTTAGAAAATGTGCTGCAGGAGGAACATGAGGCTAAGATATTGACATGGGACATGAGGTTAAACATGATAAAAGGGTTGGAAAATGCATTGTGTTACCTGCACCATGACTGCACTCCAAGCATTGTTCACAGAGACATTTCAGGAAGCAATATTCTGTTGGACTCTGAATATGAGCCTAAGATCTCTGACTTTGGGACAGCAAGGTTGCTAAAAGATGGAGAATCAAACTGGACAACTCCAGTTGGATCTTATGGCTACATTGCACTAGGGTACGAAATGATTGAAAGGATGTCATACTATGGGATAGCATCAAATCTAGTGCAGTATCTGACAAAGAAGCTTCATGAGGGTACTGTGAAATCTTCAAACCACGTTACAAACTGGGTGGGAACAGTGTGGATTATGCCAGCTGCAGGAGCATACATAGCTGACGCCTGTCTTGGCAGATATTGGACCTTTGTGATATCATCGATCATTTACCTTATGGTCCTTGTGGCTGCTATGAGGAAGTGGAAGGTAAAAGTCCCAGATGATCCAAAGGAGCTACATGAGCTTAGCATGGAAGAGTATGCAAGTAAAGGGAGAAACAGAATTTATCACAGCTCTTCAATGAGATTCCTTGACAAAGCTGCAATAAAGACTGGCCAAACTTCACCATGGATGCTTTGTACAGTGACGCAAGTTGAGGAAACCAAGCAAATGACAAAAATGATTCCTGTTCTGATTACAACATGTGTTCCAAGCACCATCATAGCTCAAACCACCACACTCTTCATAAGACAAGGCACCACTCTAGACAGAAGAATGGGACCCCACTTTGAAATCCCTCCAGCATGTCTTACAGCATTTGTAAATATCTCCATGCTGATAAGTGTTGTAATCTATGACCGAATTTTTGTTCCTGTGATCCGGCACCACACAAAGAACCCAAGAGGGATCACAATGCTGCAGAGACTTGGAATTGGCCTTGTGCTTCACATCATCATAATGGTCACTGCATGCTTGGTTGAGAGGAAGAGACTCAGTATTGCAAGAGAAAGCCAACTCTTAGACCAGCATGATACTATTCCTCTTACTATTTTCATCCTCCTCCCTCAGTTTGCTATGATAGGAATTGCTGATACCTTTGTTGATGTTGCTAAGCTAGAGTTCTTCTATGATCAAGCACCAGAAACCATGAAAAGTTTGGGAACATCATATTGCACAACCACCTTGAGCATTGGAAGTTTTTTCAGTACTTTTCTTCTATCAACTGTTGCTGATCTCACCCAAAGACATGGTCACAAGGGTTGGATTTTGGATAATCTAAACATCTCCCATTTGGATTATTATTATGCATTCTTGGCCATGCTGAGTACTATTAACTTCCTTTTCTTTGTTGTTGTTGCAAAGTTCTTTGTCTATAATGATGATGTAACACAAACCAAAATGGACTTGGAGATGAAGCATGGTTCATCTCAGGACAAGACTGGAATAAGTCAAAGTACCCCATTACCAGATGACAAGTCCTTGGGAAAACACTAA 2259 0.4046 MHLGECISLSSFSISANKIQGNIPPELGKLPRLQNLDLSENNLTGNIPVELFSSSSMLLKLNLSNNDLREDTCKDKTIFTAAVSGFFSKQFEWSNSTRARKLRELNILETDFLGQNLLVSKDLSSFKQLMCPTKKLEGPLPNLEAFNNAPAEALVSNAGLCAGPDGTRGQGSVYKALLPTGDIFAVKRLHEQEEIDFSAYKTKNFMFEIHALTNIRHRNIIKMCGVSYLGHRSMFFIYEYVERGFLENVLQEEHEAKILTWDMRLNMIKGLENALCYLHHDCTPSIVHRDISGSNILLDSEYEPKISDFGTARLLKDGESNWTTPVGSYGYIALGYEMIERMSYYGIASNLVQYLTKKLHEGTVKSSNHVTNWVGTVWIMPAAGAYIADACLGRYWTFVISSIIYLMVLVAAMRKWKVKVPDDPKELHELSMEEYASKGRNRIYHSSSMRFLDKAAIKTGQTSPWMLCTVTQVEETKQMTKMIPVLITTCVPSTIIAQTTTLFIRQGTTLDRRMGPHFEIPPACLTAFVNISMLISVVIYDRIFVPVIRHHTKNPRGITMLQRLGIGLVLHIIIMVTACLVERKRLSIARESQLLDQHDTIPLTIFILLPQFAMIGIADTFVDVAKLEFFYDQAPETMKSLGTSYCTTTLSIGSFFSTFLLSTVADLTQRHGHKGWILDNLNISHLDYYYAFLAMLSTINFLFFVVVAKFFVYNDDVTQTKMDLEMKHGSSQDKTGISQSTPLPDDKSLGKH* 753
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g03131 752 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 233 411 - -
Rops8g03131 752 Gene3D Ribonuclease Inhibitor 1 167 IPR032675 -
Rops8g03131 752 ProSitePatterns Tyrosine protein kinases specific active-site signature. 286 298 IPR008266 GO:0004672|GO:0006468
Rops8g03131 752 Gene3D MFS general substrate transporter like domains 406 720 IPR036259 -
Rops8g03131 752 ProSiteProfiles Protein kinase domain profile. 159 466 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops8g03131 752 FunFam Os07g0541700 protein 241 327 - -
Rops8g03131 752 MobiDBLite consensus disorder prediction 731 745 - -
Rops8g03131 752 MobiDBLite consensus disorder prediction 728 752 - -
Rops8g03131 752 SUPERFAMILY L domain-like 3 139 - -
Rops8g03131 752 Pfam POT family 410 677 IPR000109 GO:0016020|GO:0022857|GO:0055085
Rops8g03131 752 Gene3D Transferase(Phosphotransferase) domain 1 168 351 - -
Rops8g03131 752 SUPERFAMILY MFS general substrate transporter 352 706 IPR036259 -
Rops8g03131 752 SUPERFAMILY Protein kinase-like (PK-like) 169 334 IPR011009 -
Rops8g03131 752 Pfam Protein kinase domain 170 333 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g03131 Rops-Chr8 69226479 69234049 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g03131 408 728 Organic Solute Cotransporters AT5G46050 55.864 3.55e-115 354
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Rops8g03131 PTR2 2.7e-50 CL0015
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g03131 K26562 - gmx:100787001 556.214