Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g03095 ATGGCAAAGGAGCAAATTCAGGTGCTAAATGCACTTGATGTTGCAAAAACTCAATGGTACCACTTCACTGCAATCATCATTGCTGGAATGGGCTTCTTCACTGATGCATATGATCTATTTTGCATATCCATTGTTACCAAGTTGCTTGGTCGTTTGTACTACCACGTTGATGGTGCTGGAAAGCCCGGTACATTGCCTCCCAATGTATCAGCTGCTGTAAATGGGGTAGCTTTTTGTGGAACACTTTCAGGGCAACTTTTCTTTGGTTGGCTTGGTGATAAGTTGGGTAGGAAAAACGTCTATGGCATGACTTTGATGATCATGGTGATATGCTCTATTGGTTCTGGCCTTTCTTTTGGACATAGTGCAAAATCTGTCATGGCAACTCTTTGCTTCTTCCGGTTCTGGCTTGGGTTTGGTATTGGTGGAGACTATCCACTTTCTGCTACCATAATGTCAGAGTATTCTAATAAGAAGACCCGTGGTGCTTTCATTGCTGCAGTTTTTGCCATGCAGGGTTTTGGAATTTTGGCAGGTGGAGTATTTGCAATTATAATTTCAGCTGCATTCAAGGCCAGGTTTGATGCTCCACCTTACGAGGTTGATCCAGTTGGTTCCACTGTTCCTGAAGCAGACTATGTTTGGAGGACAATTGTGATGGTGGGAGCACTACCAGCTGCATTGACATACTACTGGCGTATGAAGATGCCAGAAACTGCCCGTTATACTGCACTAGTTGCTAAGAACACACAGCAGGCTGCAGCAGATATGTCTAAGGTTTTGCAGGTTGAGATTCAAGCTGAACCAAAGAAAGATGAGCAAACAAAGGCTAAACAATTTAGCTTGTTCTCAAAGGAGTTCCTTAGTCGCCATGGACTTCATCTACTTGGTACAGCAAGCACATGGTTCTTGCTTGATATTGCATTTTATAGTCAAAATCTCTTTCAGAAGGATATCTTCAGTGCAATTGGTTGGATCCCTCCTGCAAAAACCATGAGTGCCCTTGAGGAGGTTTATAGAATTGCAAGGGCTCAAACACTTATTGCTCTTTGCAGTACAGTTCCAGGCTACTGGTTTACAGTGGCTTTCATTGACAGGATTGGAAGATTTGCTATTCAATTAATGGGATTCTTCTTCATGTCTGTCTTCATGTTTGCTCTTGCCATTCCTTATAACCACTGGACTCATAAGGATAACAGAATAGGATTTGTGGTGTTGTATTCCTTGACCTTCTTCTTTGCAAATTTCGGGCCTAATGCTACCACATTTGTGGTGCCAGCAGAGATTTTCCCAGCTAGATTCCGATCTACTTGCCATGGAATATCAGCAGCAGCAGGGAAGCTTGGGGCTATAGTTGGTTCATTTGGGTTCTTGTATTTGGCACAGAACAAGGACAAGAGCAAAGCAGATGCAGGGTACCCTGCAGGTATTGGTGTGAAGAATTCACTGATTGTCTTGGGCGTGGTTAACGTTTTGGGCTTCTTTTTCACTTTCTTGGTGCCTGAGGCAAACGGAAAATCTTTGGAGGAGATGTCAGGTGAGAATGATGAGGAAGTTGGAACCAGGGAAGAGTCAGAGCAGACACATTCTTTAAACAACAACAGAACTGTTCCATATGTTTAG 1623 0.4325 MAKEQIQVLNALDVAKTQWYHFTAIIIAGMGFFTDAYDLFCISIVTKLLGRLYYHVDGAGKPGTLPPNVSAAVNGVAFCGTLSGQLFFGWLGDKLGRKNVYGMTLMIMVICSIGSGLSFGHSAKSVMATLCFFRFWLGFGIGGDYPLSATIMSEYSNKKTRGAFIAAVFAMQGFGILAGGVFAIIISAAFKARFDAPPYEVDPVGSTVPEADYVWRTIVMVGALPAALTYYWRMKMPETARYTALVAKNTQQAAADMSKVLQVEIQAEPKKDEQTKAKQFSLFSKEFLSRHGLHLLGTASTWFLLDIAFYSQNLFQKDIFSAIGWIPPAKTMSALEEVYRIARAQTLIALCSTVPGYWFTVAFIDRIGRFAIQLMGFFFMSVFMFALAIPYNHWTHKDNRIGFVVLYSLTFFFANFGPNATTFVVPAEIFPARFRSTCHGISAAAGKLGAIVGSFGFLYLAQNKDKSKADAGYPAGIGVKNSLIVLGVVNVLGFFFTFLVPEANGKSLEEMSGENDEEVGTREESEQTHSLNNNRTVPYV* 541
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g03095 540 Pfam Sugar (and other) transporter 26 512 IPR005828 GO:0016020|GO:0022857|GO:0055085
Rops8g03095 540 ProSiteProfiles Major facilitator superfamily (MFS) profile. 24 505 IPR020846 GO:0022857
Rops8g03095 540 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 20 503 - -
Rops8g03095 540 FunFam Inorganic phosphate transporter 1-6 20 527 - -
Rops8g03095 540 SUPERFAMILY MFS general substrate transporter 12 512 IPR036259 -
Rops8g03095 540 NCBIfam phosphate:H+ symporter 11 514 IPR004738 GO:0005315|GO:0006817|GO:0016020
Rops8g03095 540 Gene3D MFS general substrate transporter like domains 20 529 IPR036259 -
Rops8g03095 540 CDD MFS_PhT 25 502 - -
Rops8g03095 540 MobiDBLite consensus disorder prediction 509 540 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g03095 Rops-Chr8 68725839 68728877 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g03095 1 513 Inorganic Solute Cotransporters AT2G38940 83.527 0.0 912
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g03095 K08176 - gmx:100803626 1011.52
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops8g03095 8 68725839 68728877 Rops8g03095 8 68725839 68728877 ECH
Rops8g03095 8 68725839 68728877 Rops6g00089 6 2218517 2220127 PCT
Rops6g01232 6 27234640 27237744 Rops8g03095 8 68725839 68728877 PCT