Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g03087 ATGTCTCAGAAAGAATGTGCATTTGGGGTGATACATAAGAAATTCAAGCCTCACCTTTTCATGGTTCTTACTCAGATGGCAGTTACATTTCTTTATTTCCTAGTAGAGGCTTCATTTAATAATGGCATGAATCCTCATGTCTTTATTACTTACAGGCAAGCAATTGGTGGTATAGTAATATTTCCTTTTGCTTATGTTCTTGAAAGAGAAGCAAGGCCAAAGTTGACGATGACAATGTTCTCGGAGTTATTTATTCTTTCCCTCACAGGGATCAGTCTTGCCCCAAACATGTATTTTGCAAGTCTGAAATATACCTCACCTTCCTTTGTTGCATCCATGGTTAACATAATTTCATCTCTGACATTTGTGATTGCAGTTGCACTAAGGCTGGAGGATGTTGATGTTAAGAACCCTCGTGGGCTAGCTAAAATTATTGGAACCGTGCTATCATTGACTGGTGCCTTGACCATGGCTTTGTATAAAGGGCATGCAATACAAAGCTTGCAGGGTGCCCCATTCCATATCAGAGGCAAAGTAGTTCATAAGAATTGGATTAAAGGATCAATTTTGGCTATTGCAAGTTGCATATCATGGTCTTTATGGTACATAATGCAGGCATTTACAGTGAAGAAATATCCAGCACAATTATCACTAACTGCATGGATAAATTTTATCGGTGCAGCACAGTCTGCTGCCTTTACTGTCCTTGTGCAACACAAGCCTAAAGCATGGTTGGTTACATCCAGCATAGAACTCTGTTGCATATTTTATGCTGGGGTTATATGTTGTGGTTTGATTATCTTCATTCAAATCTGGACGATGGAACAAAAAGGGCCAGTCTTCGTGAGTATGTTTAATCCCCTTGGAACAGTTTTAGTGGCAATCCTATCATATTTTGTTTTGGGAGAACAACTTCACATTGGCAGTATATTGGGAGGAGTCCTTGTTATCATTGGTCTATACTTGCTTTTATGGGGAAAGGAAAGTGATCAAGATTACAAGAAGTCACAACAACAATCTTCTCCAAGTGAACAAAAAGAATGCAGGACACATTCAGAGACTTCTTCAGTAGAACAAGAGTTATCATAA 1089 0.3884 MSQKECAFGVIHKKFKPHLFMVLTQMAVTFLYFLVEASFNNGMNPHVFITYRQAIGGIVIFPFAYVLEREARPKLTMTMFSELFILSLTGISLAPNMYFASLKYTSPSFVASMVNIISSLTFVIAVALRLEDVDVKNPRGLAKIIGTVLSLTGALTMALYKGHAIQSLQGAPFHIRGKVVHKNWIKGSILAIASCISWSLWYIMQAFTVKKYPAQLSLTAWINFIGAAQSAAFTVLVQHKPKAWLVTSSIELCCIFYAGVICCGLIIFIQIWTMEQKGPVFVSMFNPLGTVLVAILSYFVLGEQLHIGSILGGVLVIIGLYLLLWGKESDQDYKKSQQQSSPSEQKECRTHSETSSVEQELS* 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g03087 362 SUPERFAMILY Multidrug resistance efflux transporter EmrE 51 162 - -
Rops8g03087 362 MobiDBLite consensus disorder prediction 334 362 - -
Rops8g03087 362 PANTHER WAT1-RELATED PROTEIN 17 337 IPR030184 GO:0016020|GO:0022857
Rops8g03087 362 SUPERFAMILY Multidrug resistance efflux transporter EmrE 244 328 - -
Rops8g03087 362 Gene3D - 218 329 - -
Rops8g03087 362 Pfam EamA-like transporter family 186 324 IPR000620 GO:0016020
Rops8g03087 362 Pfam EamA-like transporter family 26 157 IPR000620 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g03087 Rops-Chr8 68626539 68629450 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g03087 13 331 Nodulin-like Gene Family AT4G08300 35.583 9.72e-77 239
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g03087 - - gmx:100808275 516.153